YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: SPAC19A8.14
Organism: Schizosaccharomyces pombe
Length: 205 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC19A8.14.

Description E-value Query
Range
Subject
Range
PTH2_MOUSE - Peptidyl-tRNA hydrolase 2, mitochondrial OS=Mus musculus GN=Ptrh2 PE=1 SV=1
232.0 [0..19] [205..17]
gi|62078455, gi|... - gi|62078455|ref|NP_001013882.1| Bcl-2 inhibitor of transcription [Rattus norvegicus], gi|54035568|gb...
229.0 [0..19] [205..17]
ENSPTRT00000017368 - null
PTRH2 - peptidyl-tRNA hydrolase 2
gi|190690369, gi... - gi|190691749|gb|ACE87649.1| peptidyl-tRNA hydrolase 2 protein [synthetic construct], gi|190690369|gb...
224.0 [0..19] [205..17]
gi|45185442, gi|... - gi|45185442|ref|NP_983159.1| ABR210Wp [Ashbya gossypii ATCC 10895], gi|44981131|gb|AAS50983.1| ABR21...
gi|44981131 - gi|44981131|gb|AAS50983.1| ABR210Wp [Ashbya gossypii ATCC 10895]
221.0 [0..13] [205..9]
PTH2_BOVIN - Peptidyl-tRNA hydrolase 2, mitochondrial OS=Bos taurus GN=PTRH2 PE=2 SV=1
221.0 [0..18] [205..16]
gi|109114555, gi... - gi|109114555|ref|XP_001109316.1| PREDICTED: similar to Bcl-2 inhibitor of transcription isoform a is...
221.0 [0..17] [205..15]

Back

Predicted Domain #1
Region A:
Residues: [1-80]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVPFVNFMI SSFPAAVLVG AVVGFMIGRK YSVADASRGY SSKNANKASN PEKESPVSVS  60
   61 NDEDSESETE LLDMLKGNSS 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [81-205]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LAALALAEGQ TKMVLVVRTD LGMTKGKIAA QCAHAALACY KIASAVDPDL VRIWENAGQA  60
   61 KITLQAQTEE TLELLQAQAM SLGLCARVIH DAGRTQIASG SATVLGIGPG PVSVINEVTG 120
  121 SLKLF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 51.154902
Match: 1q7sA
Description: Crystal structure of bit1
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.534516847146079 bayes_pls_golite062009
aminoacyl-tRNA hydrolase activity 0.436919034752024 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle