YRC Public Data Repository - Protein Structure Prediction

Protein:	SPAC17A5.09c
Organism:	Schizosaccharomyces pombe
Length:	310 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC17A5.09c.

Description	E-value	Query Range	Subject Range
gi\|63701773, gi\|... - gi\|63701773\|ref\|XP_484582.2\| PREDICTED: hypothetical protein [Mus musculus], gi\|149268296\|ref\|XP_001...	172.0	[0..3]	[152..120]
IPP2_RAT - Protein phosphatase inhibitor 2 OS=Rattus norvegicus GN=Ppp1r2 PE=1 SV=2 gi\|1050975 - gi\|1050975\|gb\|AAB35244.1\| phosphatase inhibitor-2; I-2 [Rattus sp.]	148.0	[0..3]	[152..11]
gi\|109053998 - gi\|109053998\|ref\|XP_001097826.1\| PREDICTED: similar to protein phosphatase 1, regulatory (inhibitor)...	148.0	[0..3]	[152..11]
PPP1R2 - protein phosphatase 1, regulatory (inhibitor) subunit 2	147.0	[0..3]	[152..11]
gi\|114591204 - gi\|114591204\|ref\|XP_516963.2\| PREDICTED: protein phosphatase 1, regulatory (inhibitor) subunit 2 iso...	147.0	[0..3]	[152..11]
gi\|74002974 - gi\|74002974\|ref\|XP_535781.2\| PREDICTED: similar to protein phosphatase 1, regulatory (inhibitor) sub...	146.0	[0..3]	[152..149]

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Predicted Domain #1

Region A:
Residues: [1-152]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVKSILKHS RMSSPSLETD SMESGQQQNM VSSTPSIDMN ESDCSGTGTP SEERIRRLRW  60
   61 DEENLSKAEQ QKSAKMKITE PKTPFQRFLL PDDEVPEINL DETDSKDDFT AGTLGDTLGT 120
  121 LPSTRVSKDS KDDNVSFSSD KKQFYVKKEP FP

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	37.221849
Match:	2o8aI
Description:	No description for 2o8aI was found.

Predicted Domain #2

Region A:
Residues: [153-310]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VPCTEPTTSG DRYTVRMKAP TPKYSTDNHL PSKKELFPRE TKPQVEVVHA RINNPDDHLR  60
   61 THPSVNNLGK DSDHADKMYN EGVILGEDEA MEEEALSEAE ENIPKKKPDF NELRKKHYFA 120
  121 MAKPLKRDEL ESSGTESDLE RDNSDSGSAS DVNMNENE

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits