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View Structure Prediction Details

Protein: mde10
Organism: Schizosaccharomyces pombe
Length: 512 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mde10.

Description E-value Query
Range		 Subject
Range
VM3VA_MACLB - Zinc metalloproteinase-disintegrin-like VLAIP-A OS=Macrovipera lebetina PE=1 SV=1
 237.0 [0..3] [508..144]
VM3V1_CROAT - Zinc metalloproteinase-disintegrin-like VAP1 OS=Crotalus atrox PE=1 SV=1
 231.0 [0..3] [510..141]
VM3AD_AGKCL - Zinc metalloproteinase-disintegrin-like ACLD OS=Agkistrodon contortrix laticinctus PE=2 SV=1
 230.0 [0..3] [511..141]
VM3HA_GLOHA - Zinc metalloproteinase-disintegrin-like halysase OS=Gloydius halys PE=1 SV=1
 230.0 [0..3] [510..141]
VM3AK_DEIAC - Zinc metalloproteinase-disintegrin-like agkihagin OS=Deinagkistrodon acutus PE=2 SV=1
 226.0 [0..3] [510..141]
VM3HA_PROFL - Zinc metalloproteinase/disintegrin-like HR1a OS=Protobothrops flavoviridis PE=1 SV=1
 224.0 [0..3] [508..141]
VM3BE_BOTER - Zinc metalloproteinase-disintegrin-like berythractivase OS=Bothrops erythromelas PE=1 SV=1
 221.0 [0..3] [508..141]
VM3H3_BOTJA - Zinc metalloproteinase-disintegrin-like HF3 OS=Bothrops jararaca PE=1 SV=3
 220.0 [0..3] [511..141]
VM3E1_ECHOC - Zinc metalloproteinase-disintegrin-like Eoc1 OS=Echis ocellatus GN=Svmp3-Eoc1 PE=2 SV=1
 220.0 [0..3] [510..143]

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Predicted Domain #1
Region A:
Residues: [1-512] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLVLLFSCV LAVSSYAEII LAHSDENLLS RTKNNLSKWN ENRLYDYGSK STMSLPVSSL  60
   61 FPALQTLWIG VVADCSYVTH FTSRMEAKKH IFQEFEGVST LYEDSFNINV QIHSLILPSA 120
  121 HDCSANVVDR PEISMSPRIS IEEKLEIFSK WKYESPGNNV FEAISPHERE SFPSEPQVSV 180
  181 LFTSSVKRSP HGVSWFATIC SETHIENEWH VGPLSVVSAY PNDRLVVAHE IGHILGLIHD 240
  241 CNKKSCGDHS EACCPLSSSL CDAQELYIMN PSNSYTYANL RFSDCSILQL HSLVEKKYVS 300
  301 LSCLSKPSEK SVLRLGTCGN GIVEDGEECD CGEDCENNPC CDGKTCKLTK GSLCDDQQDA 360
  361 CCYQCHFKNA GTLCRQSTNP CDKPEFCTGI SSKCPVDENW DDGRICQDSL GMGSCASGVC 420
  421 TSASRQCKKL TNFSSLSCHS DSCKVSCQNE DGTCFISAKD YIDGTRCRGG LCYNGVCVPI 480
  481 EGSSASWSKQ PSLFCASGTM LISLAVIAWF FW

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 38.221849
Match: 2eroA
Description: No description for 2eroA was found.
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle