YRC Public Data Repository - Protein Structure Prediction

Protein:	SPAC11E3.13c
Organism:	Schizosaccharomyces pombe
Length:	510 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC11E3.13c.

Description	E-value	Query Range	Subject Range
gi\|10441337 - gi\|10441337\|gb\|AAG16996.1\|AF184908_1 pH-regulated protein 2 [Candida dubliniensis] gi\|241947959, gi... - gi\|241947959\|ref\|XP_002416702.1\| pH-regulated protein 2 [Candida dubliniensis CD36], gi\|223640040\|em...	393.0	[0..3]	[494..2]
PHR2_CANAL - pH-responsive protein 2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=PHR2 PE=2 SV=2 orf19.6081, orf1... - PHR2 CGDID:CAL0005209 Assembly 19, Contig19-10237 (161755, 160121) CDS, reverse complemented, transl...	390.0	[0..3]	[491..2]
EPD1_CANMA - Protein EPD1 OS=Candida maltosa GN=EPD1 PE=3 SV=1	388.0	[0..3]	[494..2]
gi\|18073451, gi\|... - gi\|49529260\|emb\|CAG62926.1\| unnamed protein product [Candida glabrata], gi\|18073451\|emb\|CAC83345.1\| ... gi\|50295070, gi\|... - gi\|50295070\|ref\|XP_449946.1\| hypothetical protein CAGL0M13849g [Candida glabrata CBS138], gi\|4952926...	388.0	[0..19]	[497..18]
gi\|44985443 - gi\|44985443\|gb\|AAS54139.1\| AGL352Wp [Ashbya gossypii ATCC 10895] gi\|44985443, gi\|... - gi\|45200745\|ref\|NP_986315.1\| AGL352Wp [Ashbya gossypii ATCC 10895], gi\|44985443\|gb\|AAS54139.1\| AGL35...	385.0	[0..3]	[495..2]
PHR2_CANAL - pH-responsive protein 2 OS=Candida albicans GN=PHR2 PE=2 SV=1	385.0	[0..3]	[491..2]
gi\|108597832, gi... - gi\|46277830\|gb\|AAP91684.2\| beta-1,3-glucanosyltransferase 3 [Paracoccidioides brasiliensis], gi\|1085... gi\|226278453 - gi\|226278453\|gb\|EEH34019.1\| 1,3-beta-glucanosyltransferase gel4 [Paracoccidioides brasiliensis Pb01]	384.0	[0..26]	[508..21]
gi\|50406584, gi\|... - gi\|50406584\|ref\|XP_456646.1\| hypothetical protein DEHA0A07480g [Debaryomyces hansenii CBS767], gi\|49...	383.0	[0..3]	[489..2]
gi\|3730 - gi\|3730\|emb\|CAA37512.1\| glycolipid-anchored surface protein [Saccharomyces cerevisiae] gi\|190408533 - gi\|190408533\|gb\|EDV11798.1\| cell surface glycoprotein 115-120 kDa [Saccharomyces cerevisiae RM11-1a] gi\|151946016 - gi\|151946016\|gb\|EDN64248.1\| glycophospholipid-anchored surface protein [Saccharomyces cerevisiae YJM...	378.0	[0..3]	[488..2]
gi\|119194753, gi... - gi\|90306766\|gb\|EAS36397.1\| hypothetical protein CIMG_01751 [Coccidioides immitis RS], gi\|119194753\|r...	378.0	[0..1]	[487..1]

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Predicted Domain #1

Region A:
Residues: [1-347]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNFLHFLTTS LLLLGGSRLA LADSASSAIK IKGNAFFNSD TNERFYVRGV DYQPGGSSTL  60
   61 VDPLADTSIC KRDLPYLQGL NINTIRVYQV DNSANHDECM SALQDAGIYV ILDLATSSNS 120
  121 ISRLDAASSY NAVFLQGIFA TIDAFKNYTN VLGFFAGNEV ANTAENSATT TWVKAALRDA 180
  181 KEYISKNSDR DIPVGYSAAD VAEIRVQCAD FFACGNSSVR ADFYGMNMYE WCGADSSFTI 240
  241 SGYDQRMEEF ANYSIPLFLS EYGCNDVTKE SDGTPDRPFD EVDAIFSSEM SSVFSGGLVY 300
  301 QYSEEGNNYG LVVIDGDNVT ISKNYETLKE KYASAANYTG DGDYSSS

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	63.39794
Match:	1bhgA
Description:	beta-Glucuronidase; beta-Glucuronidase, domain 3
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	1.32563207632796	bayes_pls_golite062009
hydrolase activity	0.85514037342026	bayes_pls_golite062009
hydrolase activity, acting on glycosyl bonds	0.80912338090552	bayes_pls_golite062009
hydrolase activity, hydrolyzing O-glycosyl compounds	0.41375210927547	bayes_pls_golite062009

Predicted Domain #2

Region A:
Residues: [348-510]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PATLTCPADD SYFTSFPLPT MPSEAKGFIE SGAGQPLGFN APSNQEFSAN ATALVSPGPH  60
   61 SVSTTINTNI VQATISQSST SGSSSGSSSA STTASSSSVS SGSSISSGSS SMSTSYTSAS 120
  121 GSSAHSSGSS SGSSSATSSA STFNLSRFYV FAGILAISGL VFA

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	1.17
Match:	2j63A
Description:	No description for 2j63A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: