YRC Public Data Repository - Protein Structure Prediction

Protein:	SPAC23C11.06c
Organism:	Schizosaccharomyces pombe
Length:	535 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC23C11.06c.

Description	E-value	Query Range	Subject Range
gi\|39944792, gi\|... - gi\|39944792\|ref\|XP_361933.1\| hypothetical protein MGG_04378 [Magnaporthe grisea 70-15], gb\|EAA50619....	329.0	[0..2]	[530..15]
gi\|40746544, gi\|... - gi\|67516025\|ref\|XP_657898.1\| hypothetical protein AN0294.2 [Aspergillus nidulans FGSC A4], ref\|XP_40...	312.0	[0..8]	[532..23]
gi\|220701028, gi... - gi\|238483479\|ref\|XP_002372978.1\| mitochondrial integral membrane protein [Aspergillus flavus NRRL335... gi\|169766714 - gi\|169766714\|ref\|XP_001817828.1\| hypothetical protein [Aspergillus oryzae RIB40] gi\|83765683 - gi\|83765683\|dbj\|BAE55826.1\| unnamed protein product [Aspergillus oryzae]	287.0	[0..8]	[531..33]
gi\|159130540 - gi\|159130540\|gb\|EDP55653.1\| integral membrane protein [Aspergillus fumigatus A1163] gi\|66847691, gi\|... - gi\|70990420\|ref\|XP_750059.1\| mitochondrial integral membrane protein [Aspergillus fumigatus Af293], ...	285.0	[0..8]	[532..27]
gi\|46433678, gi\|... - gi\|68487640\|ref\|XP_712301.1\| potential vacuolar protein [Candida albicans SC5314], gi\|46433678\|gb\|EA... orf19.1183 - orf19.1183 CGDID:CAL0002129 Assembly 19, Contig19-10099 (6749, 8395) CDS, translated using codon tab...	271.0	[0..2]	[529..5]
gi\|115387241, gi... - gi\|115387241\|ref\|XP_001211126.1\| conserved hypothetical protein [Aspergillus terreus NIH2624], gi\|11...	268.0	[0..3]	[532..29]
gi\|90304110, gi\|... - gi\|90304110\|gb\|EAS33741.1\| hypothetical protein CIMG_04765 [Coccidioides immitis RS], gi\|119189435\|r...	254.0	[0..10]	[531..36]
gi\|111067281 - gi\|111067281\|gb\|EAT88401.1\| hypothetical protein SNOG_04641 [Phaeosphaeria nodorum SN15]	251.0	[0..10]	[531..49]
gi\|116207056, gi... - gi\|88183418\|gb\|EAQ90886.1\| hypothetical protein CHGG_02821 [Chaetomium globosum CBS 148.51], gi\|1162...	243.0	[0..13]	[529..35]

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Predicted Domain #1

Region A:
Residues: [1-171]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTSQDVNAE AANERSALLP RFLGSHRGNV PENTDTYALT PLFYWIRSTS VGLLLITIIC  60
   61 HLFLLLNIFI SIPIISHLSP GFMPVGFTAL AAILLAMQIM FVYSPNAPER VTQRIICFLL 120
  121 AIDVLVVFLS PILRHREGWR SNAFVLWAFL MSLWIVITDL MLFRQYKEEH P

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [172-535]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DYDAIAHRGY YWSWSPSTWP WRQVGSLTAS TILSVILTIL TIHTLVTLIM RAYDGALSAP  60
   61 GQLYTVTDSK ARVHLECFGS SSSNNKTTVL VEGGEVSVHP FKEWLLNLQH TSPDLYEESK 120
  121 DFEGYENDVK PYLSPDTRVC VWDRPGMGWS DNIGSPSSVG IVMDLLTEAL AQADVSGPYV 180
  181 LVAHGIGGVY SNVFAARHLS EVKGIVFVDA GSVQTLKDSG QFLSRFLLFV RGWLSPLGIN 240
  241 RIFGSIFMGK TRQDRVYGMY SWTSDRWVKS KIEESLTGPS FSRYELQSAQ SVLPKDLPVS 300
  301 VISAGKSMKR FKKWPDEQRQ LSKLTQRTVW DIVNNAPHDV WLSDDGGDLI MKRLGEIIYG 360
  361 GWPN

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	31.522879
Match:	1cqzA
Description:	Epoxide hydrolase, N-terminal domain; Mammalian epoxide hydrolase, C-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
hydrolase activity	0.685577841077355	bayes_pls_golite062009
catalytic activity	0.629869101256762	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: