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View Structure Prediction Details

Protein: mug79
Organism: Schizosaccharomyces pombe
Length: 1318 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mug79.

Description E-value Query
Range
Subject
Range
gi|42553344, gi|... - gi|46125229|ref|XP_387168.1| hypothetical protein FG06992.1 [Gibberella zeae PH-1], gi|42553344|gb|E...
317.0 [0..655] [1303..695]
gi|71004066, gi|... - gi|71004066|ref|XP_756699.1| hypothetical protein UM00552.1 [Ustilago maydis 521], ref|XP_398167.1| ...
311.0 [0..570] [1295..763]
gi|50754699 - gi|50754699|ref|XP_425177.1| PREDICTED: similar to hypothetical protein DKFZp761B0514 [Gallus gallus...
305.0 [0..546] [1310..1000]
sec71 - Sec7 domain
SEC7A_SCHPO - Protein transport protein sec71 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sec71 PE=1...
286.0 [0..567] [967..559]
gi|2440190, gi|7... - gi|7492873|pir||T38792 probable protein transport protein sec7 homolog - fission yeast (Schizosaccha...
285.0 [0..567] [967..559]
gi|27803074, gi|... - gi|27803074|emb|CAD60777.1| unnamed protein product [Podospora anserina], gi|188219317|emb|CAP49297....
gi|189091928 - gi|189091928|ref|XP_001929797.1| [Podospora anserina]
275.0 [0..569] [1302..602]
gi|145013526, gi... - gi|39978041|ref|XP_370408.1| hypothetical protein MGG_06905 [Magnaporthe grisea 70-15], gb|EAA55248....
271.0 [0..562] [1274..331]
gi|73964779 - gi|73964779|ref|XP_857113.1| PREDICTED: similar to Cytohesin 1 (SEC7 homolog B2-1) isoform 4 [Canis ...
267.0 [0..657] [919..17]
gi|114670727 - gi|114670727|ref|XP_001157634.1| PREDICTED: pleckstrin homology, Sec7 and coiled/coil domains 1 isof...
266.0 [0..657] [900..26]

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Predicted Domain #1
Region A:
Residues: [1-294]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDFRITEGSS PTSLSVSEKI AKLESCNDSR ITCRPVRESK PTYTSGQKHS ALLSKLKRSK  60
   61 VTTDFCKLEE SKGIICQENL HTEGAKSKTE NISGEDKSSQ RRTRLKQIQE FISHRRSFLN 120
  121 SNANSVESEK ILAENNHMFN VKSKLSNKES FIKTRRPRTN GELSDLSLQP KRIFSEPVNS 180
  181 HPSQSMFGNG VRASSGSYSL KRDLKDYEEE LPSSKKRQRT PPPIVVTNFP QEIFPSKKIS 240
  241 LSAKRRIQGK YSGENVRARI ELARERNRKR DYVSNLSKGH TTNALEENPF NLGP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [295-379]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NYRASTRKCN RIKEAINLFA AKNGSMEVPP KVSVGDSVLT TSQKFLQVIR EKTALLMNQD  60
   61 SNSVQPQALA AAESPTTKAP TTKAP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [380-569]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TSEAPPKGHV KQLAKQLGNI YMPQSINNVE PTSHSSISKV VNPSEKVISK IERACLAGNG  60
   61 NVHPSIKMEK NLELNPHPRT LNATEHKINS RIQVSKLNTK NELANADPKM YLLENLSDRL 120
  121 YFCKLAKLLL RKYPLDIAEH QFALVYSRFQ RIPLKQISCL KQSLVAYYSV LSEVGITNEI 180
  181 MLRENRFSSP 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [570-702]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KTPEGLVSIS KLLLDDREHL SHDERSYIQQ LQSQIKSQSV HHENAAEEIR KMRNLRNSRI  60
   61 NSQQVGEKVF VNPDVKTMDI QETFLQDYED ETFANEGLSA SKFKEEFLLI SDSKSDLNSE 120
  121 EIATPNSLEF KNN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [703-910]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PRIKVPRSLL TILNLHDRSQ LKLFEVCHNS EFKDPINLSN CLRNLLEKQL LSYNFTDWFA  60
   61 SLGSEYENVY VKFISHYDFS SLNVYASFQK LCCDLYYGSD DYIHSPILQV FASCWLKQNS 120
  121 NYGFLNEDII VKIVLILIDL HKSTYSKKLN SYVVPMETFV KYALEKLRPL ISPDSVCILS 180
  181 KEDKKHWLKY KKNRSTFAKL LFSTWSNL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 61.522879
Match: 1bc9A
Description: CYTOHESIN-1/B2-1 SEC7 DOMAIN, NMR, MINIMIZED AVERAGE STRUCTURE
Matching Structure (courtesy of the PDB):

Predicted Domain #6
Region A:
Residues: [911-1066]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PSDIGFILEC MLKEYYDTFL KSPFAVPNAV QAQLHNQVRG DLTPKRNRSS LISELMKSSK  60
   61 LLKQESSGNK NSTSLESDAF KESSFVLNEE NGGIYAGKEI DLPEPSVIDG RPHFSVFNYT 120
  121 HHMQEEKTHN RLPWHRRGMI SYKKMVLSKN NRWVAG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.221849
Match: 1omwA
Description: G-protein coupled receptor kinase 2, N-terminal domain; G-protein coupled receptor kinase 2 (beta-adrenergic receptor kinase 1); G-protein coupled receptor kinase 2
Matching Structure (courtesy of the PDB):

Predicted Domain #7
Region A:
Residues: [1067-1318]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YWKKKYCIVD SGKLIFYKSD HLDPNACSNV SPIHREFGLQ SCLASPNLPP SINSNRNNVF  60
   61 YLNIPGNECY LFEAPSVLAM NEWIHSLNFN AAMITCPPLP ENITNTEYGW GYILTRAEKK 120
  121 AYYTAADGTK TFVGDLAQLT RWSPMDIQGL QDIPRPLRDK VHILRDCVPS LLETCLLFQS 180
  181 LPEKMEKCFA AGSKNYLKAM DNWNRKMKFL YERSMMYKEY QRVLECEYEY RKSHDFYPTL 240
  241 SPVRYPYDFK GL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.0
Match: 1xd4A
Description: Crystal structure of the DH-PH-cat module of Son of Sevenless (SOS)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle