YRC Public Data Repository - Protein Structure Prediction

Protein:	SPAC12B10.09
Organism:	Schizosaccharomyces pombe
Length:	345 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC12B10.09.

Description	E-value	Query Range	Subject Range
gi\|114674911 - gi\|114674911\|ref\|XP_524071.2\| PREDICTED: solute carrier family 25, member 23 [Pan troglodytes]	254.0	[0..44]	[340..329]
gi\|108879780, gi... - gi\|157106714\|ref\|XP_001649449.1\| small calcium-binding mitochondrial carrier, putative [Aedes aegypt...	253.0	[0..82]	[340..208]
SCM1B_XENLA - Calcium-binding mitochondrial carrier protein SCaMC-1-B OS=Xenopus laevis GN=slc25a24-b PE=2 SV=1	249.0	[0..40]	[340..153]
gi\|33598954 - gi\|33598954\|ref\|NP_037518.2\| solute carrier family 25 member 24 isoform 1 [Homo sapiens]	249.0	[0..71]	[340..183]
gi\|50906063, gi\|... - gi\|50906063\|ref\|XP_464520.1\| putative Mcsc-pending-prov protein [Oryza sativa (japonica cultivar-gro...	248.0	[0..73]	[340..184]
gi\|73959965 - gi\|73959965\|ref\|XP_854738.1\| PREDICTED: similar to solute carrier family 25 member 24 isoform 2 [Can...	248.0	[0..71]	[340..173]
gi\|109012617 - gi\|109012617\|ref\|XP_001083681.1\| PREDICTED: similar to solute carrier family 25 member 24 isoform 2 ...	248.0	[0..71]	[340..164]

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Predicted Domain #1

Region A:
Residues: [1-345]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIFNYVFSNS FSFLYLMVNV QCRIKEIMYW NICLYWDVFS KLIIYNKVCQ FGRIHIFHGK  60
   61 NRHQLLRTCH FTPSKRHSAM SFFEALGAGI CAGLAVDLSL FPIDTLKTRL QAKGGFVKNG 120
  121 GFHGVYRGLG SILVGSAPGA SLFFTTYENM KSRLSQSGLG LSDPQIHMCS ASLGEIAACI 180
  181 VRVPTEVIKQ RAQASGGTLS SRNILQTILK SNNVWRDFYA GYGITIAREI PFTLIQFPIW 240
  241 EHLKLKWRIK HSRNKNLAHE AAISGSIAGG IAAALTTPFD VVKTRIMTSQ QRLSYVFTIK 300
  301 SIVAHEGFLA LYKGIVPRVL WLSGGGAIFL GCYDVILNFM KAEGL

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	58.69897
Match:	1okcA
Description:	structure of mitochondrial ADP/ATP carrier in complex with carboxyatractyloside
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits