YRC Public Data Repository - Protein Structure Prediction

Protein:	SPAC1F12.10c
Organism:	Schizosaccharomyces pombe
Length:	147 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC1F12.10c.

Description	E-value	Query Range	Subject Range
gi\|168517, gi\|10... - gi\|168517\|gb\|AAA33483.1\| nitrate reductase, pir\|\|S51160 nitrate reductase (NADH) (EC 1.7.1.1) (clone...	151.0	[0..25]	[147..89]
gi\|484212 - gi\|484212\|gb\|AAA33712.1\| nitrate reductase apoenzyme	150.0	[0..25]	[147..503]
NIA_CICIN - Nitrate reductase [NADH] OS=Cichorium intybus GN=NIA PE=2 SV=1	149.0	[0..25]	[147..495]
gi\|2342599 - gi\|2342599\|emb\|CAA04554.1\| Nitrate reductase [Metarhizium anisopliae]	149.0	[0..15]	[146..490]
gi\|42407404, gi\|... - gi\|50946679\|ref\|XP_482867.1\| putative nitrate reductase apoenzyme [Oryza sativa (japonica cultivar-g...	149.0	[0..25]	[147..502]
NIA_CUCMA - Nitrate reductase [NADH] OS=Cucurbita maxima PE=2 SV=1	148.0	[0..25]	[147..505]

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Predicted Domain #1

Region A:
Residues: [1-147]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVALFKSSLG RPEQHQTPQI RISPASSNVE HSEKQPRRDF RVKKYVAPGF SQLNWSKLVA  60
   61 SGQNLSGVEK PIPVTKEELA KHKTKEDCWI AIRGKVYNVS AYLPYHPAGQ KRILDYAGRD 120
  121 ATVIFMKFHA WVNEEALLKT SFVGFLV

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	27.221849
Match:	2ibjA
Description:	No description for 2ibjA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits