YRC Public Data Repository - Protein Structure Prediction

Protein:	alg10
Organism:	Schizosaccharomyces pombe
Length:	445 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for alg10.

Description	E-value	Query Range	Subject Range
ALG10_ARATH - Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase OS=Arabidopsis thaliana GN=ALG1...	432.0	[0..3]	[445..4]
ALG10 - asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe) gi\|123997149, gi... - gi\|123997149\|gb\|ABM86176.1\| asparagine-linked glycosylation 10 homolog (yeast, alpha-1,2-glucosyltra...	431.0	[0..29]	[445..33]
gi\|114645362 - gi\|114645362\|ref\|XP_001169000.1\| PREDICTED: asparagine-linked glycosylation 10 homolog B isoform 1 [...	431.0	[0..29]	[445..33]
ALG10_MAGO7 - Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase OS=Magnaporthe oryzae (strain 7... ALG10_MAGGR - Alpha-1,2 glucosyltransferase ALG10 OS=Magnaporthe grisea GN=ALG10 PE=3 SV=1	429.0	[0..9]	[445..50]
gi\|109096134 - gi\|109096134\|ref\|XP_001086837.1\| PREDICTED: asparagine-linked glycosylation 10 homolog (yeast, alpha...	425.0	[0..29]	[445..33]
gi\|111307510, gi... - gi\|76682180\|ref\|XP_589768.2\| PREDICTED: similar to modifier of the HERG potassium channel isoform 1 ...	424.0	[0..29]	[445..33]
gi\|73997186 - gi\|73997186\|ref\|XP_534842.2\| PREDICTED: similar to modifier of the HERG potassium channel [Canis fam...	417.0	[0..29]	[445..33]

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Predicted Domain #1

Region A:
Residues: [1-102]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLGKAIILI LWIFLAFTGL LAIQYYVPNP YLDEIFHIAQ AQRFCRKDWD WDPAITTPPG  60
   61 LYLVSVALSP FIGCSNVSLR LINWLVGVIG LPWLINDIVS LL

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [103-189]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NNRKGDVVTY FAYTLSSLPP LWFFSFLYYT DIGSTFFVLL AYDFALRKSA FSSSVSCFFS  60
   61 LWFRQTNIVW MVFIAVTYFA SNMSFFN

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3

Region A:
Residues: [190-359]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PHLAEATFAD VLLTIISFLG VFLKNLRRFS CPILSYGAVF CSFLAFLLWN GSIVLGDKSH  60
   61 HQASIHLSQI NYFLWFFFFF SFPSYIIKYL MSHSRRSKLL SAVFSKKSFL IVSVLLLIAH 120
  121 FNTIFHPFIL ADNRHYLFYV FNRLFRIWWL KYLGPFSYLI LYYFFLDISK

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4

Region A:
Residues: [360-445]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LQMTSLTFFL LISTTILTLV PAPLVEFRYF LLPFLFWRFH LPLPSGRECL MEYALHMVIN  60
   61 SVTLYIFLFR TFIWPSEPNA LQRFMW

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits