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View Structure Prediction Details

Protein: SPCC31H12.03c
Organism: Schizosaccharomyces pombe
Length: 245 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPCC31H12.03c.

Description E-value Query
Range
Subject
Range
gi|8163670 - gi|8163670|gb|AAF73793.1|AF154024_1 surface protein PspC [Streptococcus pneumoniae]
131.0 [0..1] [236..170]
gi|70878483 - gi|70878483|gb|EAN91735.1| trans-sialidase, putative [Trypanosoma cruzi]
gi|71649745 - gi|71649745|ref|XP_813586.1| trans-sialidase [Trypanosoma cruzi strain CL Brener]
126.0 [0..3] [236..768]

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Predicted Domain #1
Region A:
Residues: [1-245]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDYKSLKVA ELREKLAEKG LSTAGNKAEL VSRLTAATES NDENTSNNNA TDLGDLAPPE  60
   61 DDIDWGDMEN DTISTDVNKP AEPESKETSA PAAAVEIEKE NESIISKETS QAPETSTGAE 120
  121 EHQETTEESK QSVSNEVSSP DVAKEQEKLI QRAKRFGIPV DDEQIKKAAR AARFGIQQPL 180
  181 ASSNNKNHNQ SKNPQNRSNS RSKQRNKNAP PKSAPSKRKS NILDDPIEAE KARKRAERFG 240
  241 VAAKN

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Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle