Protein: | SPCC965.11c |
Organism: | Schizosaccharomyces pombe |
Length: | 537 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPCC965.11c.
Description | E-value | Query Range |
Subject Range |
|
332.0 | [0..9] | [537..13] |
|
322.0 | [0..17] | [536..66] |
|
318.0 | [0..3] | [536..107] |
|
317.0 | [0..36] | [536..138] |
|
315.0 | [0..18] | [536..56] |
|
314.0 | [0..12] | [537..87] |
|
312.0 | [0..5] | [536..104] |
Region A: Residues: [1-461] |
1 11 21 31 41 51 | | | | | | 1 MEAAPSEKVP AKKLSSSENL DIGVSEVVTV DAAENNSNGI KRGLKTRHVS MMALAGIIGP 60 61 GVFIGMGSAL HIGGPVGLIV GFAIVSIVVF GVMLSIGEFN SLFDFNFNTH AARWVDPAFG 120 121 AAIGWNYVIV WLTNIAAEYT SLTSILQYWG PHVPSYGFFL IFWGFFTCYQ MLGVSVFGES 180 181 EYILAFIKLL FITGFYIFAI IYAAGGIPHH KPPNLFKEMP LAHGFGGIVS AFVYAGVFFS 240 241 GVESVSMTAA ESKNPKKAIP LAVRQTFWRI LYVYFGISIS YGITVAWNDP NLSSGSKTLK 300 301 SPMTIAIMNA GWNHAGDFVN AVILITCLSS INSGIYIGSR SLYNLAKDGM APKIFKRVDK 360 361 RGVPWVAVHS VHLFGFLSIM NYSTGAVKAY GYIINLAGVS AFIVWTAIIF VHFRFRRGWV 420 421 KQGYALSDLP FKSPLYPFPQ LIGFVIGIIL TLVQGWTVFK P |
Detection Method: | |
Confidence: | 1.46 |
Match: | 2a65A |
Description: | Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [462-537] |
1 11 21 31 41 51 | | | | | | 1 FAAGDFVDAY ILLPLFFVIW LSYKFIKKTK WVSYEDMDFI NGRRVIEPTY SNEQSSDKET 60 61 EDGKKTSFWN RVWKEV |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.