YRC Public Data Repository - Protein Structure Prediction

Protein:	mug91
Organism:	Schizosaccharomyces pombe
Length:	172 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mug91.

Description	E-value	Query Range	Subject Range
gi\|42554662, gi\|... - gi\|46125789\|ref\|XP_387448.1\| hypothetical protein FG07272.1 [Gibberella zeae PH-1], gi\|42554662\|gb\|E...	202.0	[0..2]	[148..478]
gi\|114619924 - gi\|114619924\|ref\|XP_519727.2\| PREDICTED: similar to HDCKB03P [Pan troglodytes]	191.0	[0..2]	[125..209]
gi\|109086293 - gi\|109086293\|ref\|XP_001098475.1\| PREDICTED: similar to golgi autoantigen, golgin subfamily a, 7 [Mac...	191.0	[0..2]	[125..229]
gi\|7634777 - gi\|7634777\|gb\|AAF65180.1\|AF068291_1 HDCKB03P [Homo sapiens]	190.0	[0..2]	[125..21]
GOGA7_CHICK - Golgin subfamily A member 7 OS=Gallus gallus GN=GOLGA7 PE=2 SV=1	186.0	[0..2]	[125..11]
GOGA7_RAT - Golgin subfamily A member 7 OS=Rattus norvegicus GN=Golga7 PE=2 SV=1	186.0	[0..2]	[125..11]
gi\|53733671 - gb\|AAH83994.1\| Unknown (protein for MGC:98123) [Xenopus laevis] GOGA7_MOUSE - Golgin subfamily A member 7 OS=Mus musculus GN=Golga7 PE=1 SV=1 gi\|194044207 - gi\|194044207\|ref\|XP_001928825.1\| PREDICTED: similar to Golgi autoantigen, golgin subfamily a, 7 [Sus...	186.0	[0..2]	[125..11]

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Predicted Domain #1

Region A:
Residues: [1-172]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVRIERDYS VSGDKYPQFP TDYPVPLRAY VNLEDWDVFI HTLNEKLREA FCPWSIGNLL  60
   61 DGILSVLTIY ISEFVFGSIH RKRIGAIDLY ILDFATQHNL YVASLRNMGF LSLVFHTKET 120
  121 NSKSSTLHSN PYCPEHHSIR TLPSAVTATT SNISTSSSHR SDLPNEWTNS TL

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits