YRC Public Data Repository - Protein Structure Prediction

Protein:	pis1
Organism:	Schizosaccharomyces pombe
Length:	251 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pis1.

Description	E-value	Query Range	Subject Range
gi\|40746786, gi\|... - gi\|67517274\|ref\|XP_658517.1\| hypothetical protein AN0913.2 [Aspergillus nidulans FGSC A4], ref\|XP_40...	199.0	[0..25]	[251..51]
gi\|85091917 - gi\|85091917\|ref\|XP_959136.1\| hypothetical protein NCU09192 [Neurospora crassa OR74A] gi\|32422281, gi\|... - gi\|32422281\|ref\|XP_331584.1\| hypothetical protein [Neurospora crassa], gi\|29150084\|emb\|CAD79645.1\| r...	199.0	[0..25]	[251..19]
gi\|115397603, gi... - gi\|115397603\|ref\|XP_001214393.1\| CDP-diacylglycerol--inositol 3-phosphatidyltransferase [Aspergillus...	186.0	[0..25]	[248..49]
gi\|46121551, gi\|... - gi\|46121551\|ref\|XP_385330.1\| hypothetical protein FG05154.1 [Gibberella zeae PH-1], gi\|42551595\|gb\|E...	185.0	[0..25]	[247..47]
gi\|119186113, gi... - gi\|90302449\|gb\|EAS32080.1\| hypothetical protein CIMG_03104 [Coccidioides immitis RS], gi\|119186113\|r...	183.0	[0..25]	[245..49]
gi\|111069060, gi... - gi\|169598334\|ref\|XP_001792590.1\| hypothetical protein SNOG_01968 [Phaeosphaeria nodorum SN15], gi\|11...	179.0	[0..25]	[245..30]
AGAP003478-PA - CDP-diacylglycerol--inositol 3-phosphatidyltransferase\|protein_coding\|2R:38189136:38190231:-1\|gene:A... gi\|119112425, gi... - gi\|119112425\|ref\|XP_311768.3\| AGAP003478-PA [Anopheles gambiae str. PEST], gi\|116129939\|gb\|EAA07376....	179.0	[0..25]	[249..11]
gi\|38111901, gi\|... - gi\|39946288\|ref\|XP_362681.1\| hypothetical protein MGG_08368 [Magnaporthe grisea 70-15], gb\|EAA57398....	178.0	[0..20]	[247..42]
gi\|71004210, gi\|... - gi\|71004210\|ref\|XP_756771.1\| hypothetical protein UM00624.1 [Ustilago maydis 521], ref\|XP_398239.1\| ...	178.0	[0..25]	[248..40]

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Predicted Domain #1

Region A:
Residues: [1-251]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVKFLKLSN DFPFCSGQAM SGVLDTFILT LCLGFTRVFL VLISLYFMSW HPNYCTIVYL  60
   61 YSSLLDAFDG WAARKLHQAT NFGAILDMVT DRCATSCLLC FLCAAYPKYA IIFQLLVSLD 120
  121 LASHYMHMYS TLHQGASSHK TVTKKHNWML RLYYGNNKVL FIFCAANEMF FVALYLLSFT 180
  181 PRTPPKLGYL PVPSFIYSTG ELPLSYPTLL AVLCGPICLA KQIINVVQLV NAANALVKMD 240
  241 VEQRRAAKKL Q

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	32.886057
Match:	PF01066.12
Description:	No description for PF01066.12 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits