YRC Public Data Repository - Protein Structure Prediction

Protein:	SPAC11D3.01c
Organism:	Schizosaccharomyces pombe
Length:	79 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC11D3.01c.

Description	E-value	Query Range	Subject Range
CON6_NEUCR - Conidiation-specific protein 6 OS=Neurospora crassa GN=con-6 PE=2 SV=1 CON6_NEUCR - Conidiation-specific protein 6 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / D...	94.0	[0..3]	[79..8]
SPAC869.09 - conserved fungal protein YI09_SCHPO - UPF0654 protein C869.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC869.09 PE=3 SV...	89.0	[0..1]	[79..1]
gi\|67903306, gi\|... - gi\|67903306\|ref\|XP_681909.1\| hypothetical protein AN8640.2 [Aspergillus nidulans FGSC A4], ref\|XP_41...	88.0	[0..6]	[78..7]
gi\|42547252, gi\|... - gi\|46137473\|ref\|XP_390428.1\| hypothetical protein FG10252.1 [Gibberella zeae PH-1], gi\|42547252\|gb\|E...	87.0	[0..5]	[79..4]
gi\|39968307, gi\|... - gi\|39968307\|ref\|XP_365544.1\| hypothetical protein MGG_02246 [Magnaporthe grisea 70-15], gb\|EAA54261....	84.0	[0..5]	[79..4]
gi\|1022346, gi\|2... - gi\|2130428\|pir\|\|S62478 hypothetical protein SPAC4G8.01c - fission yeast (Schizosaccharomyces pombe)...	65.0	[0..1]	[43..1]
gi\|119189007, gi... - gi\|90303896\|gb\|EAS33527.1\| predicted protein [Coccidioides immitis RS], gi\|119189007\|ref\|XP_00124511...	57.0	[0..3]	[68..12]

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Predicted Domain #1

Region A:
Residues: [1-79]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPNPGNVIGG HKAALHNPNV SEETKQREKE YLEEHEGEVG EEHQKNTGNV RGGYKAAMHN  60
   61 PNVSGEAKQR AQEELENLE

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits