YRC Public Data Repository - Protein Structure Prediction

Protein:	SPAC24B11.05
Organism:	Schizosaccharomyces pombe
Length:	226 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC24B11.05.

Description	E-value	Query Range	Subject Range
gi\|229811380, gi... - gi\|229845694\|ref\|ZP_04465817.1\| phosphoglycolate phosphatase [Haemophilus influenzae 6P18H1], gi\|229... gi\|144985848, gi... - gi\|145633479\|ref\|ZP_01789208.1\| phosphoglycolate phosphatase [Haemophilus influenzae 3655], gi\|14498... GPH_HAEI8 - Phosphoglycolate phosphatase OS=Haemophilus influenzae (strain 86-028NP) GN=NTHI0697 PE=3 SV=1	144.0	[0..1]	[220..1]
GPH_HAEIN - Phosphoglycolate phosphatase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) G... GPH_HAEIN - Phosphoglycolate phosphatase OS=Haemophilus influenzae GN=gph PE=3 SV=1	143.0	[0..1]	[220..1]
gi\|145272121, gi... - gi\|145638526\|ref\|ZP_01794135.1\| phosphoglycolate phosphatase [Haemophilus influenzae PittII], gi\|145... gi\|53733330 - gi\|53733330\|ref\|ZP_00156383.2\| COG0546: Predicted phosphatases [Haemophilus influenzae R2866]	142.0	[0..1]	[220..1]
gi\|241884351, gi... - gi\|241903285\|ref\|ZP_04788011.1\| HAD-superfamily hydrolase, subfamily IA, variant 3 [Thermoanaerobact... gi\|242258243, gi... - gi\|242258243\|ref\|ZP_04803066.1\| HAD-superfamily hydrolase, subfamily IA, variant 3 [Thermoanaerobact... gi\|166853930, gi... - gi\|167039690\|ref\|YP_001662675.1\| HAD family hydrolase [Thermoanaerobacter sp. X514], gi\|166853930\|gb... gi\|76589066, gi\|... - gi\|76795752\|ref\|ZP_00778124.1\| HAD-superfamily hydrolase, subfamily IA, variant 3:HAD-superfamily hy...	142.0	[0..5]	[224..2]
gi\|88795676, gi\|... - gi\|88795676\|ref\|ZP_01111369.1\| phosphoglycolate phosphatase [Alteromonas macleodii 'Deep ecotype'], ...	140.0	[0..1]	[219..1]
gi\|170718574, gi... - gi\|53728307\|ref\|ZP_00348122.1\| COG0546: Predicted phosphatases [Haemophilus somnus 2336], gi\|1707185...	140.0	[0..1]	[219..1]
gi\|112822365, gi... - gi\|113460322\|ref\|YP_718383.1\| phosphoglycolate phosphatase [Haemophilus somnus 129PT], gi\|112822365\|...	139.0	[0..1]	[219..1]
gi\|255518257 - gi\|255518257\|ref\|ZP_05385933.1\| putative hydrolase [Clostridium difficile QCD-97b34] gi\|255651376 - gi\|255651376\|ref\|ZP_05398278.1\| putative hydrolase [Clostridium difficile QCD-37x79] gi\|254976461 - gi\|254976461\|ref\|ZP_05272933.1\| putative hydrolase [Clostridium difficile QCD-66c26] gi\|255093845 - gi\|255093845\|ref\|ZP_05323323.1\| putative hydrolase [Clostridium difficile CIP 107932] gi\|255315597 - gi\|255315597\|ref\|ZP_05357180.1\| putative hydrolase [Clostridium difficile QCD-76w55] gi\|145953352, gi... - gi\|90573404\|ref\|ZP_01229919.1\| hypothetical protein CdifQ_02003170 [Clostridium difficile QCD-32g58]...	139.0	[0..4]	[226..3]
GPH_MANSM - Phosphoglycolate phosphatase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=MS2331 PE=3 SV=1	139.0	[0..1]	[220..1]
gi\|255102031 - gi\|255102031\|ref\|ZP_05331008.1\| putative hydrolase [Clostridium difficile QCD-63q42] gi\|255307899 - gi\|255307899\|ref\|ZP_05352070.1\| putative hydrolase [Clostridium difficile ATCC 43255] gi\|126700473, gi... - gi\|126700473\|ref\|YP_001089370.1\| putative hydrolase [Clostridium difficile 630], gi\|115251910\|emb\|CA...	139.0	[0..4]	[226..3]

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Predicted Domain #1

Region A:
Residues: [1-226]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVEQKIIFF DLDNCLYPKS YKIHNMMAAR ITAFFSDKLG IPTEEAERLR EVYYRHYGIA  60
   61 IRGLVLHHEI DAVDYDQRVD QSLPLEKVIK KDEVLREMLL ELRKKYKCWI FTNAYIVHAN 120
  121 RVLKYLGIED CFDGITYCDY NAKDLIAKPM PEMYERVMRE AGVTDKDKCI FVDDSYGNIL 180
  181 GAREFGWKYT VQLVEHGDPL PQPQAGSHVI RDIHKFKHLL DEIDGE

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	33.39794
Match:	2hszA
Description:	No description for 2hszA was found.

Predicted functions:

Term	Confidence	Notes
catalytic activity	1.55296860681783	bayes_pls_golite062009
hydrolase activity	1.08172369228125	bayes_pls_golite062009
nucleic acid binding	0.622587075720369	bayes_pls_golite062009
DNA binding	0.452491037562571	bayes_pls_golite062009
binding	0.348700024627711	bayes_pls_golite062009
inorganic cation transmembrane transporter activity	0.236599510904756	bayes_pls_golite062009
cation transmembrane transporter activity	0.177647623090281	bayes_pls_golite062009
phosphatase activity	0.159899259988948	bayes_pls_golite062009
phosphoric ester hydrolase activity	0.103902756538853	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: