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View Structure Prediction Details

Protein: SPAC4G8.12c
Organism: Schizosaccharomyces pombe
Length: 533 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC4G8.12c.

Description E-value Query
Range
Subject
Range
PIGB_MOUSE - GPI mannosyltransferase 3 OS=Mus musculus GN=Pigb PE=2 SV=2
351.0 [0..7] [432..51]
gi|109484925 - gi|109484925|ref|XP_001053705.1| PREDICTED: similar to phosphatidylinositol glycan, class B [Rattus ...
350.0 [0..7] [432..130]
gi|38105917, gi|... - gi|39940522|ref|XP_359798.1| hypothetical protein MG04979.4 [Magnaporthe grisea 70-15], gb|EAA52287....
346.0 [0..7] [516..2]
PIGB_BOVIN - GPI mannosyltransferase 3 OS=Bos taurus GN=PIGB PE=2 SV=1
345.0 [0..7] [438..52]
gi|17389331 - gi|17389331|gb|AAH17711.1| Phosphatidylinositol glycan anchor biosynthesis, class B [Homo sapiens]
345.0 [0..7] [430..62]
gi|4498 - gi|4498|emb|CAA41123.1| SMP3 protein [Saccharomyces cerevisiae]
343.0 [0..5] [512..2]

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Predicted Domain #1
Region A:
Residues: [1-160]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKNRKYAII YTFLLILRFW FSQGSSYIHP DEHLQSFQIF ANKLFGWKVE LPWEFTTKKP  60
   61 IRSVVPLNVM LLPIFLLCRC ICKSNCSPYP ILLFTRLYMC LISLLIDLSI WNIVPLNARW 120
  121 SALLLYSSSF MATTFQTHTF TNSIETIFFF LTILFLSKLN 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [161-245]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SVPLNKKISY LYTFLLAIVS VLGFFTRITF LAFVIAPYIY FSVRCFKKNV NNPKDIFLHL  60
   61 CIFVSVSFAT VLACILEDYK FYGVF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [246-414]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VITFWNNLKY NSQIENLSQH GLHSRLTHFF TNMPLLCGPL IFVPKLWDVR KPATWLWLLP  60
   61 VFILSLFPHQ EPRFLLPAAS IFIVNSGCLV RSYWIKFLFV MYAVVLAVFF GIMHQNGVIP 120
  121 AVLEVKNIIE QRNVTTMENC NLYFNPEMPT TIYFWKIYSA PTWMLARPK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [415-533]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FSQINTSHLY NYSTKQMISK FWETYYEEVK VVNLPEENTT EFQASTLLVC PVAMLQTSSY  60
   61 LQNLTMLHYI PYHVDLDDTD ELPLAELIMN HGIGIFTAKE ICENNTITNE LPTVLRSVG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle