YRC Public Data Repository - Protein Structure Prediction

Protein:	SPAC2G11.05c
Organism:	Schizosaccharomyces pombe
Length:	701 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC2G11.05c.

Description	E-value	Query Range	Subject Range
gi\|109040970 - gi\|109040970\|ref\|XP_001100428.1\| PREDICTED: similar to protein tyrosine phosphatase, non-receptor ty...	238.0	[0..1]	[683..144]
PTN23_MOUSE - Tyrosine-protein phosphatase non-receptor type 23 OS=Mus musculus GN=Ptpn23 PE=1 SV=2	237.0	[0..1]	[685..7]
gi\|49097742, gi\|... - gi\|67540048\|ref\|XP_663798.1\| hypothetical protein AN6194.2 [Aspergillus nidulans FGSC A4], ref\|XP_41...	237.0	[0..2]	[700..557]
PTPN23 - protein tyrosine phosphatase, non-receptor type 23	232.0	[0..1]	[683..7]
gi\|68388302 - gi\|68388302\|ref\|XP_696268.1\| PREDICTED: similar to slow myosin heavy chain 1 [Danio rerio]	229.0	[0..179]	[699..1838]
gi\|118780066, gi... - gi\|118780066\|ref\|XP_309922.3\| ENSANGP00000015063 [Anopheles gambiae str. PEST], gi\|116131253\|gb\|EAA0...	223.0	[0..1]	[687..7]
gi\|73985929 - gi\|73985929\|ref\|XP_851530.1\| PREDICTED: similar to protein tyrosine phosphatase, non-receptor type 2...	203.0	[0..1]	[675..114]
MYH2_PIG - Myosin-2 OS=Sus scrofa GN=MYH2 PE=2 SV=1 gi\|55741490 - ref\|NP_999301.1\| myosin heavy chain 2a [Sus scrofa]	197.0	[0..179]	[699..838]

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Predicted Domain #1

Region A:
Residues: [1-701]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEFLNIPTKN TFHWSCDPLF NELKRLSCFK SFTYENDLKT FKALRSQLCL SHPSINSLSS  60
   61 FQTYHQLLCV LEQKHLSECV APFVWTLSSS SNERESFENL IFEHACLIYR LACTYHTTAI 120
  121 SLCNEKPPNL VQACQYFQLS AGCFRYINDF YIYTKSLDFN ENLLKAWEIY CLAEAQTCIF 180
  181 SKANSNDTTS ESIIVKILAK VFLLYEDAYK LFKNATGAPS IFVHWTYIQK LFYQTITYQI 240
  241 ISRTSYSLNK YGENISYLRL SLLHCKEALK TRFDFGFNVK VYEKLEKLES SLQFELKRNE 300
  301 RDNDFIHLQP EIPVGSFPLL DTVTMVQSIT PDVLTDKTAA YPYFSTCLDK EFMDLIEEHE 360
  361 KNILDAAVKS IDCLTKEGTE KLFALMEEIK SVNDNRYITE TSNKVMENFT EIKNLGGLEF 420
  421 LRSEASSLDC LIDKVNGTYR HCCQALDEII NSVKSSQNMK EKGFYSDVIK LHEEVSLLKV 480
  481 NVENSQNAKD TIQKDISAFG KDIFELSAQS ERILSNLAEK KNPNTDQLLL QANSYLAQWD 540
  541 LLKDERNMLK KLGSNDYFNI SMYSNHTDIH SLLKCFREAV DAKWNFRRQR ERQEIIIQNV 600
  601 EKLKSYLNSF KVQAECSEIS KILSFSQETE KKYKFLLQTV RNETEIAREL YNIICRAEER 660
  661 YSQYENRYEN ENRLNKIKLQ HSSSNAFNPE IHKIKFKSSK K

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	30.69897
Match:	2oevA
Description:	No description for 2oevA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits