YRC Public Data Repository - Protein Structure Prediction

Protein:	SPAC22G7.11c
Organism:	Schizosaccharomyces pombe
Length:	140 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC22G7.11c.

Description	E-value	Query Range	Subject Range
SPAC869.09 - conserved fungal protein YI09_SCHPO - UPF0654 protein C869.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC869.09 PE=3 SV...	113.0	[0..1]	[139..1]
gi\|16416058 - gi\|16416058\|emb\|CAB88608.2\| hypothetical protein [Neurospora crassa]	110.0	[0..3]	[134..2]
gi\|49097042, gi\|... - gi\|67539348\|ref\|XP_663448.1\| hypothetical protein AN5844.2 [Aspergillus nidulans FGSC A4], ref\|XP_40...	108.0	[0..12]	[137..9]
gi\|2130332, gi\|1... - gi\|2130332\|pir\|\|S62455 hypothetical protein SPAC22G7.11c, SPAC4G8.01c - fission yeast (Schizosacchar...	107.0	[0..49]	[140..1]
gi\|85104300 - gi\|85104300\|ref\|XP_961721.1\| hypothetical protein gi\|32412244, gi\|... - gi\|32412244\|ref\|XP_326602.1\| hypothetical protein ( hypothetical protein 13E11.400 [imported] - Neur...	103.0	[0..3]	[107..33]
gi\|42547252, gi\|... - gi\|46137473\|ref\|XP_390428.1\| hypothetical protein FG10252.1 [Gibberella zeae PH-1], gi\|42547252\|gb\|E...	71.0	[0..5]	[135..4]
gi\|88178805, gi\|... - gi\|88178805\|gb\|EAQ86273.1\| hypothetical protein CHGG_07526 [Chaetomium globosum CBS 148.51], gi\|1161...	71.0	[0..64]	[134..31]

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Predicted Domain #1

Region A:
Residues: [1-140]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPDPNRVLAG KKATLHNPNV SQQAKERAED YIESHSSGQE TGDYSAQAGG RDLDYEDLGD  60
   61 YDEDADFDNE EGLNVLGDES GFVDDPMKTG DLVEEDQLEG KNIENVRGGY KATMHNPNVS 120
  121 KQAKTRAQRA LEEIDDETQA

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

		MCM Score	GO Score	GO Term	SCOP Match	SCOP Description
View	Download	0.248	0.970	cytosol	a.1.1	Globin-like

Predicted functions:

Term	Confidence	Notes
binding	0.637143821914946	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: