YRC Public Data Repository - Protein Structure Prediction

Protein:	SPAC24H6.02c
Organism:	Schizosaccharomyces pombe
Length:	175 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC24H6.02c.

Description	E-value	Query Range	Subject Range
gi\|116126281, gi... - gi\|118786355\|ref\|XP_315385.3\| ENSANGP00000021116 [Anopheles gambiae str. PEST], gi\|116126281\|gb\|EAA1...	183.0	[0..3]	[139..2]
gi\|42415411 - gi\|42415411\|gb\|AAS15675.1\| LP13032p [Drosophila melanogaster]	168.0	[0..16]	[158..43]
gi\|46107370, gi\|... - gi\|46107370\|ref\|XP_380744.1\| hypothetical protein FG00568.1 [Gibberella zeae PH-1], gi\|42546386\|gb\|E...	168.0	[0..47]	[174..57]
gi\|109109820 - gi\|109109820\|ref\|XP_001117966.1\| PREDICTED: similar to CG12379-PA [Macaca mulatta]	167.0	[0..34]	[155..35]
gi\|109469628, gi... - gi\|34853079\|ref\|XP_216011.2\| PREDICTED: similar to CG12379-PA [Rattus norvegicus], gi\|109469628\|ref\|...	163.0	[0..41]	[159..92]
gi\|114627557 - gi\|114627557\|ref\|XP_520365.2\| PREDICTED: similar to OTTHUMP00000022587 [Pan troglodytes]	163.0	[0..34]	[155..35]
DNLZ - DNL-type zinc finger	163.0	[0..34]	[155..35]
DNLZ_MOUSE - DNL-type zinc finger protein OS=Mus musculus GN=Dnlz PE=1 SV=1	161.0	[0..37]	[168..41]
gi\|76676986 - gi\|76676986\|ref\|XP_591925.2\| PREDICTED: similar to CG12379-PA [Bos taurus]	160.0	[0..32]	[174..78]
gi\|38107255, gi\|... - gi\|39972871\|ref\|XP_367826.1\| hypothetical protein MGG_07730 [Magnaporthe grisea 70-15], gb\|EAA53453....	153.0	[0..48]	[160..86]

Back

Predicted Domain #1

Region A:
Residues: [1-175]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWSFARYTQK FCLRNLQLKN FSNKVKVSSL LFCSPNVRNI SNWQCKRFTQ SDAKDLASGV  60
   61 PSVKSDADQL QPKPTYNVSF TCTVCNTRSN HNFSKQAYHN GTVLVQCPKC KNRHLMADHL 120
  121 KIFSEERVTI EDILAKKGET FKKGYGQVIN GNVVEFKPPQ FKIRPAKSSS SNSSK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	33.30103
Match:	2e2zA
Description:	No description for 2e2zA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits