| Protein: | SPAC18B11.06 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 327 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC18B11.06.
| Description | E-value | Query Range |
Subject Range |
|
|
257.0 | [0..2] | [291..29] |
|
|
250.0 | [0..4] | [284..28] |
|
|
249.0 | [0..1] | [291..26] |
|
|
249.0 | [0..4] | [284..28] |
|
|
248.0 | [0..4] | [283..28] |
|
|
245.0 | [0..4] | [284..28] |
|
Region A: Residues: [1-76] |
1 11 21 31 41 51
| | | | | |
1 MDVLNKSIQT ALEALPKTSS SSSDGVSLVS LKCQLLLSYV QKLAFLMLVK LDDESFLQHQ 60
61 DVVEKLVQLR IEIEKI
|
| Detection Method: |  |
| Confidence: | 5.200659 |
| Match: | PF04000.6 |
| Description: | No description for PF04000.6 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.901 | 0.009 | rRNA processing | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
|
Region A: Residues: [77-327] |
1 11 21 31 41 51
| | | | | |
1 RPLENRIQYS VDKLLRAAGR KEEIGSIKEP ENNGNDKDSQ DSLKLHYKPN LSEFADDSDG 60
61 PASENNVVKE DDKSSISSED EEEELRSAKD GIYRPPRIRA VTMDSEKRTR HRPNHLVDEF 120
121 VSSDMSSVPQ SMPSVGSNLE KRGRVIHADE RELQKMRERI EYEESNYTRL PKLSKKDLKK 180
181 SKRVKKHDYG GEDWSLLDRK FHDDDFSNRK LDLTSRAKRR ANFEDVNDGS LASPVQIGQS 240
241 YRKRKKNLKR R
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
