| Protein: | snf5 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 632 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for snf5.
| Description | E-value | Query Range |
Subject Range |
|
|
548.0 | [0..35] | [624..136] |
|
|
503.0 | [0..32] | [624..50] |
|
|
492.0 | [0..25] | [624..127] |
|
|
481.0 | [0..33] | [624..85] |
|
|
472.0 | [0..32] | [624..119] |
|
|
442.0 | [0..25] | [623..133] |
|
|
432.0 | [0..33] | [601..77] |
|
|
412.0 | [0..27] | [550..335] |
|
|
387.0 | [0..7] | [624..49] |
|
Region A: Residues: [1-234] |
1 11 21 31 41 51
| | | | | |
1 MDKDIGSAVA ELQVCSTHYA MTIVSCGFHS PQSLMNADLQ HCLLADQNYL LNNSNKNKGS 60
61 IIEENTRKPF QSARNLQTSL KTHPESAITR YGLGYAGFGN GWTALKPKIL FPSQKRRVKG 120
121 RFTFPFSRRS NLAQSKLPVD LVPIRLEIDA DRYKLRDSFT WNLYDKCISL DQFAEQICID 180
181 YDIPLHNVHI VQNISKSIQA QINDYEPRKA QSNLSFVSDV SSSTSETVYA HEPS
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [235-392] |
1 11 21 31 41 51
| | | | | |
1 DSLAKASKQQ IPTVQNDLRI LIKLDITIGR LNLIDQFEWN LFAPESSAEE FATVMCLDLG 60
61 LSGEFCTAVA HSIREQCQMY IKYLSLIGYL FDGSEIEDEE VRSYILPPLK NTLRFSDMES 120
121 SSFAPMIYEL NDAEMERQDR GYDREARRMR RRQGRAKH
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.458 | d.19.1 | MHC antigen-recognition domain |
| View | Download | 0.608 | d.14.1 | Ribosomal protein S5 domain 2-like |
| View | Download | 0.406 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.485 | d.15.5 | Staphylokinase/streptokinase |
| View | Download | 0.436 | d.14.1 | Ribosomal protein S5 domain 2-like |
|
Region A: Residues: [393-632] |
1 11 21 31 41 51
| | | | | |
1 GIMLPDLRDI PKIHRSLFPS SSVPSDDDFM HALSLSTNSD GETLNEINTN NPEREHLIVR 60
61 LKVDSQKLKI IVEQSQTLTL NNFQQRKLTP LPNSMSFDSL NEFESERNTP STYGQNISPL 120
121 PQFSSPSLSS DAFLTNSNSS ESALVHMQKL NLPDFTPSWV KRCVIETFAK FPNDRFNVIV 180
181 KPALNPAERM TVRICCHDCI NEYFTAGPGF TFGNFHIHLL SSSHQQKKEV RMNTVLDRNT 240
241
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
