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View Structure Prediction Details

Protein: SPAC5H10.12c
Organism: Schizosaccharomyces pombe
Length: 371 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC5H10.12c.

Description E-value Query
Range
Subject
Range
gi|4588376 - gi|4588376|gb|AAD26116.1|AF106954_1 galactinol synthase [Brassica napus]
272.0 [0..46] [370..4]
GOLS1_ARATH - Galactinol synthase 1 OS=Arabidopsis thaliana GN=GOLS1 PE=1 SV=1
269.0 [0..40] [370..3]
gi|92885321 - gi|92885321|gb|ABE87756.1| Glycosyl transferase, family 8 [Medicago truncatula]
268.0 [0..62] [370..18]
gi|5541885 - gi|5541885|emb|CAB51130.1| putative galactinol synthase [Pisum sativum]
261.0 [0..49] [370..1]
gi|20340247 - gi|20340247|gb|AAM19710.1|AF499723_1 galactinol synthase-like protein [Thellungiella halophila]
258.0 [0..51] [370..6]
gi|162459789, gi... - gi|33323017|gb|AAQ07248.1|AF497507_1 galactinol synthase 1 [Zea mays], gi|162459789|ref|NP_001105748...
256.0 [0..49] [367..5]
gi|18874400 - gi|18874400|gb|AAL78686.1| galactinol synthase [Cucumis melo]
255.0 [0..59] [370..8]
gi|32345700 - gi|32345700|gb|AAM96870.1| fagopyritol synthase 1 [Fagopyrum esculentum]
255.0 [0..54] [371..10]
GOLS1_AJURE - Galactinol synthase 1 OS=Ajuga reptans GN=GOLS1 PE=1 SV=1
254.0 [0..68] [369..22]

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Predicted Domain #1
Region A:
Residues: [1-371]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRISLSNFL SLPRYKFLLF SVVLIIVMTT LVFNGHDYKQ TLNDRLTSLK NNFVEENDNA  60
   61 VLKEEPGKYT YMSLFTMPST EEDYYFNATR VLIHRLKYHP TTKSKYPIHI LALRGVDEWK 120
  121 IERFRKDGAS VIVIDPIASS DIVYDTSSFS QEISARYEQM FSKLRIFEQI QFDKICVIDS 180
  181 DILIMKNIDD IFDTPYMYQQ INTLNYTRLP SYTKPDDDTV YHFNEDFKEY GASRSEFYPY 240
  241 LLAAVSDRGE HHSIPPEDTP YFNAGLMLIR PSELHFNRIL KIGRFPYMYE NAKMMEQSLL 300
  301 NLAFSLDGWF PWTRLDPYYN GVWPSIDERP LLKTAHGKFW NIGSSEFAPV YLADWYAAYG 360
  361 EMLSFHKYET H

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 51.39794
Match: 1zcuA
Description: apo form of the 162S mutant of glycogenin
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
mannosyltransferase activity 5.57855076532185 bayes_pls_golite062009
transferase activity, transferring hexosyl groups 4.49413422196176 bayes_pls_golite062009
UDP-glycosyltransferase activity 4.08451171179562 bayes_pls_golite062009
alpha-1,2-mannosyltransferase activity 3.80392076707564 bayes_pls_golite062009
acetylgalactosaminyltransferase activity 3.4614674054855 bayes_pls_golite062009
polypeptide N-acetylgalactosaminyltransferase activity 3.19923094610567 bayes_pls_golite062009
transferase activity 2.62166586999833 bayes_pls_golite062009
transferase activity, transferring glycosyl groups 2.60650378115696 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 2.01768771829228 bayes_pls_golite062009
catalytic activity 1.88676710996045 bayes_pls_golite062009
nucleotidyltransferase activity 1.03393419806381 bayes_pls_golite062009
glucuronosyltransferase activity 0.36353543999278 bayes_pls_golite062009
uridylyltransferase activity 0.321928989676507 bayes_pls_golite062009
UDP-galactosyltransferase activity 0.10185872015123 bayes_pls_golite062009
galactosyltransferase activity 0.0931461042017721 bayes_pls_golite062009
binding 0.074398891333042 bayes_pls_golite062009
alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity 0.0339369954475406 bayes_pls_golite062009
acetylglucosaminyltransferase activity 0.0278258721775009 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle