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View Structure Prediction Details

Protein: gmh1
Organism: Schizosaccharomyces pombe
Length: 329 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gmh1.

Description E-value Query
Range
Subject
Range
GMH3_SCHPO - Alpha-1,2-galactosyltransferase gmh3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gmh3 ...
gmh3 - alpha-1,2-galactosyltransferase Gmh3
358.0 [0..14] [328..14]
gi|207346534 - gi|207346534|gb|EDZ73006.1| YDR245Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|190404806 - gi|190404806|gb|EDV08073.1| galactosyltransferase [Saccharomyces cerevisiae RM11-1a]
MNN10 - Subunit of a Golgi mannosyltransferase complex also containing Anp1p, Mnn9p, Mnn11p, and Hoc1p that ...
MNN10_YEAST - Probable alpha-1,6-mannosyltransferase MNN10 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c...
329.0 [0..12] [326..51]
gi|39975379, gi|... - gi|39975379|ref|XP_369080.1| hypothetical protein MGG_00164 [Magnaporthe grisea 70-15], gb|EAA48506....
312.0 [0..69] [326..151]
gi|59802932 - gi|59802932|gb|AAX07671.1| alpha-1,2-galactosyltransferase-like protein [Magnaporthe grisea]
298.0 [0..51] [327..56]
gi|28925217, gi|... - gi|32413136|ref|XP_327048.1| hypothetical protein [Neurospora crassa], gi|28925217|gb|EAA34298.1| co...
gi|85110589 - gi|85110589|ref|XP_963534.1| hypothetical protein NCU06762 [Neurospora crassa OR74A]
294.0 [0..27] [326..3]

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Predicted Domain #1
Region A:
Residues: [1-83]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSFFTKNTL TKRKLIMLAL AIVFTFFAFG LYFIPHDEIS VFDFKLPALQ YETTVTSLDN  60
   61 FLIGGSTTLY TATVNHEDLN EPK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [84-189]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SHEIVMLLAS DGNVGSFESN LLDDCFKNRI EYAKLQNYNF EFVNVSSLVV PPVWGKMPAI  60
   61 LQTMRKYPSA KWIWWLDQDA LIMNKNLSLQ ELFLSPAMLQ KSLLRE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 5.39794
Match: 2p6wA
Description: No description for 2p6wA was found.

Predicted Domain #3
Region A:
Residues: [190-329]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QPIINSFGED NFRITPAAYS KEMIEQIQFL ISQDHNGLNA GSFLVRNSRS IALLMDLLTD  60
   61 PSLADAGVVR HEQDLIGYFI QKHSQVASMV GILPQRFINA FHEGPPTMQW QEGDLALHFA 120
  121 GCWVENKCAE LWTKYKDKII 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.91
Match: 2p6wA
Description: No description for 2p6wA was found.

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