| Protein: | vph1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 805 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for vph1.
| Description | E-value | Query Range |
Subject Range |
|
|
829.0 | [0..1] | [805..175] |
|
|
826.0 | [0..1] | [805..26] |
|
|
825.0 | [0..1] | [805..26] |
|
Region A: Residues: [1-487] |
1 11 21 31 41 51
| | | | | |
1 MSALGELSTI HFKDLNPDVV AFQRSFVREI RRLTDTERLL RYLHSEIDLN GIHVPDHNLP 60
61 PSYESVLESS TIEDIIERIT RLEARVRQLV ESSQLLEARY LQQLEFANVL TKADAFFSKS 120
121 GNTVDPLRNN YETSSIFSGE DDTTAPLIEN ALELGTTGTF DSEETSPQMN TTLDFVSGII 180
181 PTVKFQFLER ILWRTLRGNL FIHQVRADDS LIHGAEKNEE KTIFLVIAHG TQILLRIRKI 240
241 SESLGATLFP VEEDAPGRTS QIQQANVSIS DLNAVLENTR SALYTELTFI AEHISAWEAV 300
301 LHKDKTVFQV MNLFNYDQNH KCLIAEGWCP TANLPMVQKT LRNISDLTDS QAPTILNVVH 360
361 TSEQPPTYFR VNKFTEGFQS IIDSYGIATY REVNHGIVAI VTFPFLFAIM FGDLGHGAIM 420
421 ASVALMFVLY EKTLGAKKDL DEIVGMVFYG RYIVLLMGLF SMYVGFVYND LFSKPMSIFS 480
481 SRWVWPV
|
| Detection Method: |  |
| Confidence: | 12.522879 |
| Match: | 1ciiA |
| Description: | COLICIN IA |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [488-617] |
1 11 21 31 41 51
| | | | | |
1 KSEEAIARAV QVGTYPIGID PTWHSADNNL LFMNSYKMKL SIILGVIHMT FCLFLSLSNY 60
61 RFFKRKLDIY AVFVPSLIFL EAIFGYLVIT IVYKWCIDWK AKDLQPPSLL NMLILMFLSP 120
121 GTLEDQLYPG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [618-805] |
1 11 21 31 41 51
| | | | | |
1 QKYLQVGLVI AALICVPWLL IVKPFVLWRR HSNEENKYQS LNSDLPNVDE ADALMAVDSQ 60
61 EKQAEPFELG EVVIHQVIHT IEFCLGCVSH TASYLRLWAL SLAHNQLSSV LWNMTLANGF 120
121 RMTGIVGSIF VVILFGFWFI ATCVVLVAME GTSAMLHSLR LHWVEGMSKH FEGEGYAFTP 180
181 FTFKVTAE
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
