| Protein: | vma10 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 108 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for vma10.
| Description | E-value | Query Range |
Subject Range |
|
|
134.0 | [0..4] | [108..107] |
|
|
111.0 | [0..3] | [108..2] |
|
|
111.0 | [0..3] | [108..2] |
|
|
111.0 | [0..3] | [108..2] |
|
|
109.0 | [0..3] | [108..2] |
|
Region A: Residues: [1-108] |
1 11 21 31 41 51
| | | | | |
1 MSAQTNSGIQ QLLEAEKVAR NIVEKARQHR TQRLKDARLE AKREIDEYAS KKEEEFKKSE 60
61 SQASGIYSQA EAESKKQVQD TFASIETSSQ KNSDKVVDAI LSITCNVK
|
| Detection Method: |  |
| Confidence: | 45.468521 |
| Match: | PF03179.6 |
| Description: | No description for PF03179.6 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.919 | N/A | N/A | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.893 | N/A | N/A | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.787 | N/A | N/A | a.29.2 | Bromodomain |
| View | Download | 0.776 | N/A | N/A | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.763 | N/A | N/A | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.751 | N/A | N/A | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.749 | N/A | N/A | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.734 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.665 | N/A | N/A | a.2.7 | tRNA-binding arm |
| View | Download | 0.660 | N/A | N/A | a.25.1 | Ferritin-like |
