YRC Public Data Repository - Protein Structure Prediction

Protein:	SPCC1322.04
Organism:	Schizosaccharomyces pombe
Length:	506 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPCC1322.04.

Description	E-value	Query Range	Subject Range
gi\|39951977, gi\|... - gi\|39951977\|ref\|XP_363705.1\| hypothetical protein MG01631.4 [Magnaporthe grisea 70-15], gb\|EAA55980....	694.0	[0..10]	[506..33]
gi\|57236787 - gi\|57236787\|gb\|AAW49005.1\| UDP-glucose pyrophosphorylase [Emericella nidulans]	693.0	[0..9]	[506..17]
gi\|40742791, gi\|... - gi\|67904322\|ref\|XP_682417.1\| hypothetical protein AN9148.2 [Aspergillus nidulans FGSC A4], ref\|XP_41...	687.0	[0..15]	[506..75]
gi\|115385262, gi... - gi\|115385262\|ref\|XP_001209178.1\| UTP--glucose-1-phosphate uridylyltransferase [Aspergillus terreus N...	686.0	[0..18]	[506..177]
gi\|119188835, gi... - gi\|90303810\|gb\|EAS33441.1\| hypothetical protein CIMG_04465 [Coccidioides immitis RS], gi\|119188835\|r... gi\|240111462 - gi\|240111462\|gb\|EER29615.1\| UTP-glucose-1-phosphate uridylyltransferase, putative [Coccidioides posa...	682.0	[0..10]	[506..27]
gi\|83774203 - gi\|83774203\|dbj\|BAE64328.1\| unnamed protein product [Aspergillus oryzae] gi\|169781996 - gi\|169781996\|ref\|XP_001825461.1\| hypothetical protein [Aspergillus oryzae RIB40]	681.0	[0..9]	[506..24]
gi\|111061990 - gi\|111061990\|gb\|EAT83110.1\| hypothetical protein SNOG_09845 [Phaeosphaeria nodorum SN15]	679.0	[0..10]	[506..27]
gi\|66171085 - gi\|66171085\|gb\|AAY42971.1\| pyrophosphorylase [Aspergillus fumigatus] gi\|70982442, gi\|... - gi\|70982442\|ref\|XP_746749.1\| UTP-glucose-1-phosphate uridylyltransferase Ugp1 [Aspergillus fumigatus... gi\|159123010 - gi\|159123010\|gb\|EDP48130.1\| UTP-glucose-1-phosphate uridylyltransferase Ugp1, putative [Aspergillus ...	678.0	[0..11]	[506..16]
gi\|46107282, gi\|... - gi\|46107282\|ref\|XP_380700.1\| hypothetical protein FG00524.1 [Gibberella zeae PH-1], gi\|42545913\|gb\|E...	675.0	[0..10]	[506..25]
gi\|116181760, gi... - gi\|88185805\|gb\|EAQ93273.1\| conserved hypothetical protein [Chaetomium globosum CBS 148.51], gi\|11618...	671.0	[0..10]	[506..27]

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Predicted Domain #1

Region A:
Residues: [1-506]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLAPRPLGR QHSKSQSAFA FDNTATSIAA STMKNELNHL ASTVKDPLAK KAFQKEMDNF  60
   61 FSLFSRYLQE DARGSEINWD LVESPKPEQV VEYDTITEAG GLSRDYLNKL AVLKLNGGLG 120
  121 TTMGCVGPKS IIEVRDGNSF LDLSVRQIEH LNRKYNVNVP FVLMNSFNTD EATAKVIKKY 180
  181 EAHKIDILTF NQSRYPRVHK ETLLPVPHTA DSAIDEWYPP GHGDVFEALT NSGIIDTLIA 240
  241 QGKEYLFVSN IDNLGAVVDL NILNHMVETN AEYLMELTNK TKADVKGGTL IDYDGNVRLL 300
  301 EIAQVPPQHV EEFKSIKKFK YFNTNNLWFH LPSVKRVVNN HELSMEIIPN KKTIKHKGEN 360
  361 INIIQLETAA GAAIRHFKNA HGVNVPRRRF LPVKTCSDLL LVKSDLYSIN HGQVEMNPRR 420
  421 FGGTAPLVKL GAHFKKVADF SAHIPSIPKI LELDHLTITG DVNIGRNVTL KGTVIIVASD 480
  481 ANRIDIPNGS VLENCVITGN LNILEH

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	1000.0
Match:	2i5kA
Description:	No description for 2i5kA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits