| Protein: | ubp22 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 1108 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ubp22.
| Description | E-value | Query Range |
Subject Range |
|
|
882.0 | [0..8] | [1108..5] |
|
|
852.0 | [0..10] | [1099..66] |
|
|
847.0 | [0..7] | [1108..20] |
|
|
833.0 | [0..4] | [1108..13] |
|
|
832.0 | [0..4] | [1108..13] |
|
Region A: Residues: [1-586] |
1 11 21 31 41 51
| | | | | |
1 MVTGETLVDS QKSLINNDTL LNEKLKEDFE ENVSIDVKIH EELRRALPDY EESGFQRFTW 60
61 HIKSWHELDR RAVSPQFAVG SRQFKITYFP QGTLQSAGFT SIFLEYIPSE EEKLSNKYGC 120
121 CCQFAFVISN PRKPSLSVAN SAHCRFSPEI VDWGFTQFAE LKKLLCRQAP DVPPIVEDGA 180
181 LLLTAYVRIL KDPTGVLWHS FNDYDSKIAT GYVGLKNQGA TCYMNSLLQS LYIIHAFRRI 240
241 VYQIPTDSPQ GKDSIAYALQ RCFYNLQFMN EPVSTTELTK SFGWDSLDSF MQHDVQEFNR 300
301 VLQDNLERSM RDTKVENALT NLFVGKMKSY IACVNVNFES ARSEDYWDIQ LNVKGMKNLE 360
361 DSFRSYIQVE TLEGDNCYFA DTYGFQEAKK GVIFESFPPI LHLQLKRFEY DFERDMMIKI 420
421 NDRYEFPLEF DAKAFLSPEA DQSQNCEYVL YGVLVHSGDL HNGHYYALLK TEKDGPWYKY 480
481 DDTRVTRATL REVLEENYGG DYIMHPPFRS PVKLKRFMSA YMLLYLRKDK LDELMNPVSA 540
541 DEIPEHLKEA LNPSIQLAEL RRKERLESHL YTKVQLITPE FYSEHH
|
| Detection Method: |  |
| Confidence: | 90.09691 |
| Match: | 2f1zA |
| Description: | Crystal structure of HAUSP |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [587-694] |
1 11 21 31 41 51
| | | | | |
1 EFDIADFGNA YKEETIPQFR IKKEAKFSEF IPIVAEKLGY PQECMRFWYV VKRHNCTVRV 60
61 ESPVNELNST MEEVKNVWNS QGEILRLYLE ITPENELSSS LTHQNTGE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [695-1108] |
1 11 21 31 41 51
| | | | | |
1 WNAFIFVKYF DRKSQEISGC GTLHVNKSDE IRSICPLLCE RANLPKNTPL NIYEEIKPGM 60
61 VDFLRLEKTF TQSELSTGDI ICFEPCRPSA LEDDIVNSGF DSALKLYDFL SNKVLVLFRP 120
121 RFIDQDSIIE FEMLLDRRIK YDDLCIELGQ KLGIGADHIR LTTCNPLTYS AGMVVPNDSN 180
181 ITLYEILYSS EEEMPSNVIF YETMDVSLSD LDRKRLVRLR WLVDGLANIE LVEAYINKSG 240
241 DINDLFGAVC ERFPDSDLRK KKVRVYEVFE SRYHRDLSLR TLIRTINPAA TLVGEVVPLD 300
301 QLQLYPEEKI VQVHHFHKDI ARIHGIPFSF VIKPQEKFID TKLRLAARTQ YPESIFSVIK 360
361 FCVVDFDNNR VVYLNDEDIT YDVVEKLNGT LALDRAKKDS KKPNILDRAI QMKN
|
| Detection Method: | |
| Confidence: | 0.95 |
| Match: | 2gfoA |
| Description: | No description for 2gfoA was found. |
