YRC Public Data Repository - Protein Structure Prediction

Protein:	SPAC3F10.03
Organism:	Schizosaccharomyces pombe
Length:	652 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC3F10.03.

Description	E-value	Query Range	Subject Range
gi\|40740933, gi\|... - gi\|67903696\|ref\|XP_682104.1\| hypothetical protein AN8835.2 [Aspergillus nidulans FGSC A4], ref\|XP_41...	488.0	[0..4]	[651..6]
gi\|39976837, gi\|... - gi\|39976837\|ref\|XP_369806.1\| hypothetical protein MG06321.4 [Magnaporthe grisea 70-15], gb\|EAA56350....	483.0	[0..2]	[651..5]
gi\|109473554 - gi\|109473554\|ref\|XP_001061006.1\| PREDICTED: similar to glycyl-tRNA synthetase [Rattus norvegicus]	474.0	[0..1]	[651..188]
gi\|28918380, gi\|... - gi\|32403756\|ref\|XP_322491.1\| hypothetical protein [Neurospora crassa], gi\|28918380\|gb\|EAA28055.1\| gl... gi\|85084305 - gi\|85084305\|ref\|XP_957291.1\| glycyl-tRNA synthetase 1 [Neurospora crassa OR74A]	468.0	[0..2]	[651..5]
gi\|74226707 - gi\|74226707\|dbj\|BAE27003.1\| unnamed protein product [Mus musculus]	464.0	[0..1]	[651..100]
gi\|46125161, gi\|... - gi\|46125161\|ref\|XP_387134.1\| hypothetical protein FG06958.1 [Gibberella zeae PH-1], gi\|42553575\|gb\|E...	463.0	[0..2]	[651..5]

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Predicted Domain #1

Region A:
Residues: [1-652]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEVSKAAAF DRTQFEELMK KRFFFSPSFQ IYGGISGLYD YGPPGSALQS NLVDIWRKHF  60
   61 VIEESMLEVD CSMLTPHEVL KTSGHVDKFA DWMCKDPATG EIFRADHLVE EVLEARLKGD 120
  121 KEARGQNSND QPEESDDKKK RKKKVKEIRA TRLDDKTVEE YEFILAQIDN YDGDQLGELM 180
  181 KKYDIRNPAT NGELETPRQF NLMFETQIGP SGGLKGYLRP ETAQGQFLNF SRLLEFNNGK 240
  241 VPFASAMVGK AFRNEISPRS GLLRVREFLM AEVEHFVDPK NKEHDRFDEV SHMPLRLLPR 300
  301 GVQLEGKTDI LEMPIGDAVK KGIVDNTTLG YFMARISLFL EKIGIDMNRV RFRQHMSNEM 360
  361 AHYACDCWDA EIQCSYGWIE CVGCADRSAY DLSVHSKATK TPLVVQEALP EPVVVEQFEV 420
  421 EVNRKKFGPR FKRDAKAVEE AMISWPESEK VEKSAQLVAE GKIIVNVNGV EHTVESDLVT 480
  481 IEKRKHTEHI RTYTPNVIEP SFGLGRILYV LMEHAYWTRP EDVNRGVLSF PASIAPIKAL 540
  541 IVPLSRNAEF APFVKKLSAK LRNLGISNKI DDSNANIGRR YARNDELGTP FGLTVDFETL 600
  601 QNETITLRER DSTKQVRGSQ DEVIAALVSM VEGKSSFEDA LAKFGEFKST QE

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	127.0
Match:	2q5hA
Description:	No description for 2q5hA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits