YRC Public Data Repository - Protein Structure Prediction

Protein:	SPBC3H7.07c
Organism:	Schizosaccharomyces pombe
Length:	298 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC3H7.07c.

Description	E-value	Query Range	Subject Range
gi\|76151977 - gi\|76151977\|gb\|ABA39707.1\| TcrA [Enterococcus faecium]	218.0	[0..3]	[296..459]
gi\|145408869, gi... - gi\|82499630\|ref\|ZP_00885070.1\| ATPase, E1-E2 type:Copper ion-binding:Copper-translocating P-type ATP...	212.0	[0..3]	[296..469]
gi\|89897256, gi\|... - gi\|89897256\|ref\|YP_520743.1\| hypothetical protein DSY4510 [Desulfitobacterium hafniense Y51], gi\|893...	211.0	[0..3]	[296..468]
gi\|29374937, gi\|... - gi\|29374937\|ref\|NP_814090.1\| copper-translocating P-type ATPase [Enterococcus faecalis V583], gi\|293...	209.0	[0..3]	[296..467]
gi\|91199950 - gi\|91199950\|emb\|CAJ72992.1\| strongly similar to copper-transporting ATPase [Candidatus Kuenenia stut...	209.0	[0..3]	[296..421]
gi\|158320102, gi... - gi\|158320102\|ref\|YP_001512609.1\| heavy metal translocating P-type ATPase [Alkaliphilus oremlandii Oh...	208.0	[0..3]	[296..464]
gi\|119864307, gi... - gi\|119945703\|ref\|YP_943383.1\| heavy metal translocating P-type ATPase [Psychromonas ingrahamii 37], ...	207.0	[0..3]	[296..460]
gi\|71066142, gi\|... - gi\|71066142\|ref\|YP_264869.1\| copper/silver efflux P-type ATPase [Psychrobacter arcticus 273-4], gi\|7...	206.0	[0..3]	[296..465]
gi\|114776656, gi... - gi\|114776656\|ref\|ZP_01451699.1\| Heavy metal translocating P-type ATPase [Mariprofundus ferrooxydans ...	206.0	[0..3]	[296..494]
gi\|1353678 - gi\|1353678\|gb\|AAB01764.1\| heavy-metal transporting P-type ATPase gi\|227163523, gi... - gi\|227356413\|ref\|ZP_03840801.1\| copper-exporting ATPase [Proteus mirabilis ATCC 29906], gi\|227163523...	206.0	[0..3]	[296..475]

Back

Predicted Domain #1

Region A:
Residues: [1-67]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVNAAIVVSS NRPNVLEQIS SLFRDGKTRS LGEQWTLVSG QLKGTFEDAK DACNRISATE  60
   61 NVDCNCL

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

		MCM Score	GO Score	GO Term	SCOP Match	SCOP Description
View	Download	0.852	0.081	phosphoserine phosphatase activity	a.52.1	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin

Predicted Domain #2

Region A:
Residues: [68-298]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SEATFSTKKK LVVFDMDSTL IQQECIDELA AEAGIQKEVA TITSLAMNGE IDFQESLRRR  60
   61 VSLLQGLSVD VINKVIGKIT FTPGAKQLCH CLKQMGATLV VASGGFVPMA EYVKGQLDLD 120
  121 YAYANVLEFS DDGKFLTGKV QGAIVDGQRK ASILREKREE LGLNKLETMA VGDGANDLVM 180
  181 MAESGLGIAF KAKPKVQLLA DSKINLPSLQ NALYLLGIDE QQQKKLLENK N

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	24.522879
Match:	1f5sA
Description:	Phosphoserine phosphatase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
phosphoserine phosphatase activity	2.609399110972	bayes_pls_golite062009
catalytic activity	1.55296860681783	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: