| Protein: | cps3 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 583 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cps3.
| Description | E-value | Query Range |
Subject Range |
|
|
159.0 | [0..79] | [571..110] |
|
|
155.0 | [0..96] | [582..26] |
|
|
152.0 | [0..93] | [575..471] |
|
|
148.0 | [0..111] | [579..633] |
|
|
147.0 | [0..86] | [582..1476] |
|
|
145.0 | [0..88] | [582..825] |
|
|
140.0 | [0..61] | [570..108] |
|
|
140.0 | [0..199] | [579..115] |
|
Region A: Residues: [1-96] |
1 11 21 31 41 51
| | | | | |
1 MTKKNAFKNS EDMKKYHLSE FNSEATSLTR PSPKSLQHVP CKFFRQGTCT SGKNCIFSHD 60
61 LELATEKTIC KYFQKGNCKF GSKCALEHVL PDGRKV
|
| Detection Method: |  |
| Confidence: | 9.09691 |
| Match: | 2d9nA |
| Description: | No description for 2d9nA was found. |
|
Region A: Residues: [97-185] |
1 11 21 31 41 51
| | | | | |
1 KTRAFAPSTT AMGSSSQNIS AAPMANIISN NDKILPMTTM ASATASEEKN RIKDEALVIK 60
61 KEESNVAIPS EVTVAANAFS ASTEDVYSI
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.326 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.431 | d.88.1 | SRF-like |
| View | Download | 0.261 | c.78.2 | Aspartate/glutamate racemase |
| View | Download | 0.403 | a.60.5 | Barrier-to-autointegration factor, BAF |
| View | Download | 0.223 | a.58.1 | Chemotaxis receptor methyltransferase CheR, N-terminal domain |
|
Region A: Residues: [186-304] |
1 11 21 31 41 51
| | | | | |
1 VGDSLSKKAS VKDFSDVTGI ETIPAYVEAT NGSSTVRSPH AKRSLSSISV KSSTSPFSGS 60
61 KFLSSSSYPH TPEAHLNSNH ISPASFGSGI RTRNIFNPES MSLGLKPPIL NRSYSASMA
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [305-444] |
1 11 21 31 41 51
| | | | | |
1 PGFSMNTFTA TGNLGRPTKS PSVPTSVGSN KSRKFPGING STLTATPSSL ENLYPLSSRR 60
61 SVPNLISSLG TSPSTFSSQF LKSTDRTHSF TSKLQSFNPV GTSLLASSLG TSQEDSVNYD 120
121 IPDEFANEED FIPNSLQELL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [445-583] |
1 11 21 31 41 51
| | | | | |
1 TPEELERKMS HGDEAVSSSS ASRFMSKVSS NLNSGNPTPY NSYNGTPTSS RFVAFFDRHR 60
61 QESEKATPPS LNKVSQEPLT ATTPKNLGNL TAISETLENG QTLKSNMASS IEKSKTSTEV 120
121 VASYDTTLDE ETQFQMDEA
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
