| Protein: | sec15 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 785 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sec15.
| Description | E-value | Query Range |
Subject Range |
|
|
919.0 | [0..4] | [783..133] |
|
|
919.0 | [0..4] | [783..134] |
|
|
909.0 | [0..4] | [783..31] |
|
|
905.0 | [0..4] | [783..13] |
|
|
902.0 | [0..4] | [783..13] |
|
|
901.0 | [0..3] | [783..16] |
|
Region A: Residues: [1-189] |
1 11 21 31 41 51
| | | | | |
1 MDIDVLEFVD KIASIESAGD TLDRLPQLIS LACEKGQETQ VYERLNELAS KSAIRVEQLS 60
61 AENNQDFSKS VNQLSVVRSE LRSLQSLMAD LNTDIQASGR DLQNMKQQLN SLSTSERFLT 120
121 KYHNLVRSCM QVLHQVQYSQ ELLSKKQYLP TLRICSEISE VHLKRLDGLG MYSTIQQYIV 180
181 TTKEAICSA
|
| Detection Method: |  |
| Confidence: | 27.39794 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [190-263] |
1 11 21 31 41 51
| | | | | |
1 VMEDLHEWLF SIRQKLPLVG KSCSQQIDEA RRRWAREYKE DLVNLSSKTS ISLELYLLEM 60
61 MDFSPLDNEI VKIS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [264-360] |
1 11 21 31 41 51
| | | | | |
1 FEPLYICLQV HSYLGLLSSF RSSFERDRRR QQEFLAPKSL TTLDMAVVSE WLNSIAGFMI 60
61 VEYYILQCIP NFRSYEEVQN IWTIICEKLV ETILSVA
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.875 | 0.023 | vesicle docking during exocytosis | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
|
Region A: Residues: [361-706] |
1 11 21 31 41 51
| | | | | |
1 FTEQSTTTII KLKNQIVLLM HTMERFGFSV ESLRNLCVEL IDAFGGALIL KHSVFFEEAF 60
61 EKDVYAPMIV ETQEEYDHYI APYWNFPSEP FPRTMSFSKM CPLCCTTLSK FVRHFFMFLN 120
121 DSVILATEVN EKAPRFYRRF ILRSLVDRLK SLYPKLALSQ MSQLVKNFYA FEDPLLQIEK 180
181 SLVLNKPIHQ IGAEASSSNN VKSTELLEGL ANARKSALHE IFVKINLKID DFLGLAEYDW 240
241 TTTQVRKDVS GYLQEMVTYL QTMYLESLAG LPKHDKSYVY LETLDHLCTA MVDLLSDPSI 300
301 RKVTTAAAEG FKLDVEYLES FAAQVPDQSI VNADSFIELR QCANLL
|
| Detection Method: | |
| Confidence: | 95.69897 |
| Match: | 2a2fX |
| Description: | Crystal Structure of Sec15 C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [707-785] |
1 11 21 31 41 51
| | | | | |
1 LGDNMEEYLD TDKFMRDFNR LQPAVAIKFL ERYNIPACLQ DNFTNLLCRH INNYSANPLS 60
61 NDRPKRRAIE ILIATLKKR
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
