YRC Public Data Repository - Protein Structure Prediction

Protein:	sat1
Organism:	Schizosaccharomyces pombe
Length:	550 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sat1.

Description	E-value	Query Range	Subject Range
gi\|2612955, gi\|1... - gi\|2612955\|gb\|AAB84238.1\| Sat1 [Schizosaccharomyces pombe], pir\|\|T43544 sat1 protein - fission yeast...	538.0	[0..114]	[550..5]
gi\|67540238, gi\|... - gi\|67540238\|ref\|XP_663893.1\| hypothetical protein AN6289.2 [Aspergillus nidulans FGSC A4], ref\|XP_41...	486.0	[0..28]	[482..333]
gi\|39971705, gi\|... - gi\|39971705\|ref\|XP_367243.1\| hypothetical protein MG07168.4 [Magnaporthe grisea 70-15], gb\|EAA56813....	480.0	[0..33]	[458..121]
gi\|42546665, gi\|... - gi\|46108150\|ref\|XP_381133.1\| hypothetical protein FG00957.1 [Gibberella zeae PH-1], gi\|42546665\|gb\|E...	454.0	[0..34]	[482..201]
gi\|46099340, gi\|... - gi\|71018703\|ref\|XP_759582.1\| hypothetical protein UM03435.1 [Ustilago maydis 521], ref\|XP_401050.1\| ...	445.0	[0..32]	[529..339]
gi\|85110754 - gi\|85110754\|ref\|XP_963615.1\| hypothetical protein NCU06774 [Neurospora crassa OR74A] gi\|18376017, gi\|... - gi\|32413160\|ref\|XP_327060.1\| hypothetical protein [Neurospora crassa], gi\|28925301\|gb\|EAA34379.1\| co...	439.0	[0..31]	[457..448]
gi\|83769698 - gi\|83769698\|dbj\|BAE59833.1\| unnamed protein product [Aspergillus oryzae] gi\|169774735 - gi\|169774735\|ref\|XP_001821835.1\| hypothetical protein [Aspergillus oryzae RIB40]	420.0	[0..37]	[482..361]
gi\|71001778, gi\|... - gi\|71001778\|ref\|XP_755570.1\| intracellular protein transport protein (Sat1) [Aspergillus fumigatus A... gi\|159129630 - gi\|159129630\|gb\|EDP54744.1\| intracellular protein transport protein (Sat1), putative [Aspergillus fu...	420.0	[0..37]	[482..359]
gi\|114196227, gi... - gi\|115383976\|ref\|XP_001208535.1\| conserved hypothetical protein [Aspergillus terreus NIH2624], gi\|11...	407.0	[0..31]	[482..351]
gi\|88176537, gi\|... - gi\|88176537\|gb\|EAQ84005.1\| hypothetical protein CHGG_10409 [Chaetomium globosum CBS 148.51], gi\|1162...	382.0	[0..30]	[434..289]

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Predicted Domain #1

Region A:
Residues: [1-447]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTECDVQMYM PVNVVQSGTD FECIVKFTNL RSSEDVNLLL CYASIHGEMY LDYVLVRVTE  60
   61 FDEVQRQGLL NKRTMSGLVH IPKVSSSYSV INTLNGMIGN LFGVKQASTL TEASEQKQEN 120
  121 AIPVLLTRPD ILGVDITLSP GEEKCFRLKR RIPLRTAPTY KGLAFRFQHA LVIGVQSATN 180
  181 NACVEHEFEI TIVPNVQQQP ELPLGKNSGN RQSSKLFADL SKPIIETDAA EIEEVSAEKA 240
  241 RRQFGKNGIR LSQDAQEEEK QKKKYEQHIK KLLDGESNEE GGGEFQDHGM RSEINEEVLE 300
  301 EEDEEKIALL KKLESKQPMA TRFEITSKQK VLCRLLLSKS RYRTGEMMMI ELEGLDAMVR 360
  361 QVHMQLESVE RIVPDIRIRN SVGTERATRK VWCRITRGVF ELENMSASMV VPEECPETFE 420
  421 TQQFGVEHFL RVELLRAVNK KREMQGP

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	1.08
Match:	2fauA
Description:	No description for 2fauA was found.

Predicted Domain #2

Region A:
Residues: [448-550]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AHPRYSEEVQ SPSRSRYSEE VQRVSEGRLS EEVSKEEEKK GGRESGQHKR MASLTNSREM  60
   61 QIQHAPTTFA AETIQCVLPI RIEKRVVWME DGMEGGMEGM QPV

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits