Protein: | rps002 |
Organism: | Schizosaccharomyces pombe |
Length: | 287 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for rps002.
Description | E-value | Query Range |
Subject Range |
|
355.0 | [0..1] | [287..1] |
|
355.0 | [0..1] | [277..1] |
|
354.0 | [0..1] | [277..1] |
|
354.0 | [0..1] | [277..1] |
|
354.0 | [0..1] | [277..1] |
|
354.0 | [0..1] | [277..1] |
|
354.0 | [0..1] | [277..1] |
Region A: Residues: [1-211] |
1 11 21 31 41 51 | | | | | | 1 MAESIARPSV LNATDDDIKN LLAADSHIGS KNLEVRMENY VWKRRSDGIH IINLGKTWEK 60 61 LVLAARVIAT IENPADVCVI SSRPYGHRAV LKFAAHTGAT AIAGRFTPGN FTNYITRTYR 120 121 EPRLIIVTDP RADAQAIKEA SFVNIPVIAL CDTDSILNHV DVAIPINNKG YKSIGLAWYL 180 181 LAREVLRLRG NISRTTAWEV MPDLYFYRDP E |
Detection Method: | |
Confidence: | 59.0 |
Match: | 1s1hB |
Description: | Structure of the ribosomal 80S-eEF2-sordarin complex from yeast obtained by docking atomic models for RNA and protein components into a 11.7 A cryo-EM map. This file, 1S1H, Contains 40S subunit. The 60S Ribosomal Subunit Is In File 1S1I. |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [212-287] |
1 11 21 31 41 51 | | | | | | 1 EIEREEEQKA AAAAAAEEEA QLAAQTAAAE FEVTDSAAGT VDPTILDNAT AGQVGQTTWE 60 61 GDAEWNITGA APSEWA |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.