| Protein: | pom1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 1087 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pom1.
| Description | E-value | Query Range |
Subject Range |
|
|
353.0 | [0..669] | [1064..1] |
|
|
352.0 | [0..675] | [1047..1] |
|
|
352.0 | [0..675] | [1039..1] |
|
|
349.0 | [0..560] | [1064..10] |
|
|
349.0 | [0..674] | [1087..1] |
|
|
349.0 | [0..675] | [1039..1] |
|
|
348.0 | [0..660] | [1038..19] |
|
|
348.0 | [0..678] | [1038..33] |
|
Region A: Residues: [1-171] |
1 11 21 31 41 51
| | | | | |
1 MGYLQSQKAV SLGDENTDAL FKLHTSNRKS ANMFGIKSEL LNPSELSAVG SYSNDICPNR 60
61 QSSSSTAADT SPSTNASNTN ISFPEQEHKD ELFMNVEPKG VGSSMDNHAI TIHHSTGNGL 120
121 LRSSFDHDYR QKNSPRNSIH RLSNISIGNN PIDFESSQQN NPSSLNTSSH H
|
| Detection Method: |  |
| Confidence: | 1.17 |
| Match: | 1pk8A |
| Description: | Crystal Structure of Rat Synapsin I C Domain Complexed to Ca.ATP |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [172-349] |
1 11 21 31 41 51
| | | | | |
1 RTSSISNSKS FGTSLSYYNR SSKPSDWNQQ NNGGHLSGVI SITQDVSSVP LQSSVFSSGN 60
61 HAYHASMAPK RSGSWRHTNF HSTSHPRAAS IGNKSGIPPV PTIPPNIGHS TDHQHPKANI 120
121 SGSLTKSSSE SKNLSTIQSP LKTSNSFFKE LSPHSQITLS NVKNNHSHVG SQTKSHSF
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [350-568] |
1 11 21 31 41 51
| | | | | |
1 ATPSVFDNNK PVSSDNHNNT TTSSQVHPDS RNPDPKAAPK AVSQKTNVDG HRNHEAKHGN 60
61 TVQNESKSQK SSNKEGRSSR GGFFSRLSFS RSSSRMKKGS KAKHEDAPDV PAIPHAYIAD 120
121 SSTKSSYRNG KKTPTRTKSR MQQFINWFKP SKERSSNGNS DSASPPPVPR LSITRSQVSR 180
181 EPEKPEEIPS VPPLPSNFKD KGHVPQQRSV SYTPKRSSD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [569-636] |
1 11 21 31 41 51
| | | | | |
1 TSESLQPSLS FASSNVLSEP FDRKVADLAM KAINSKRINK LLDDAKVMQS LLDRACIITP 60
61 VRNTEVQL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [637-1010] |
1 11 21 31 41 51
| | | | | |
1 INTAPLTEYE QDEINNYDNI YFTGLRNVDK RRSADENTSS NFGFDDERGD YKVVLGDHIA 60
61 YRYEVVDFLG KGSFGQVLRC IDYETGKLVA LKIIRNKKRF HMQALVETKI LQKIREWDPL 120
121 DEYCMVQYTD HFYFRDHLCV ATELLGKNLY ELIKSNGFKG LPIVVIKSIT RQLIQCLTLL 180
181 NEKHVIHCDL KPENILLCHP FKSQVKVIDF GSSCFEGECV YTYIQSRFYR SPEVILGMGY 240
241 GTPIDVWSLG CIIAEMYTGF PLFPGENEQE QLACIMEIFG PPDHSLIDKC SRKKVFFDSS 300
301 GKPRPFVSSK GVSRRPFSKS LHQVLQCKDV SFLSFISDCL KWDPDERMTP QQAAQHDFLT 360
361 GKQDVRRPNT APAR
|
| Detection Method: | |
| Confidence: | 69.30103 |
| Match: | 2exeA |
| Description: | Crystal structure of the phosphorylated CLK3 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1011-1087] |
1 11 21 31 41 51
| | | | | |
1 QKFARPPNIE TAPIPRPLPN LPMEYNDHTL PSPKEPSNQA SNLVRSSDKF PNLLTNLDYS 60
61 IISDNGFLRK PVEKSRP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
