YRC Public Data Repository - Protein Structure Prediction

Protein:	pho2
Organism:	Schizosaccharomyces pombe
Length:	298 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pho2.

Description	E-value	Query Range	Subject Range
gi\|49650397 - gi\|49650397\|emb\|CAG80131.1\| YALI0E28919p [Yarrowia lipolytica] gi\|50554239, gi\|... - gi\|50554239\|ref\|XP_504528.1\| YALI0E28919p [Yarrowia lipolytica], gi\|49650397\|emb\|CAG80131.1\| unnamed...	190.0	[0..1]	[296..1]
gi\|49077478, gi\|... - gi\|71021791\|ref\|XP_761126.1\| hypothetical protein UM04979.1 [Ustilago maydis 521], ref\|XP_402594.1\| ...	187.0	[0..3]	[294..386]
gi\|37362312, gi\|... - gi\|47086593\|ref\|NP_997891.1\| hypothetical protein LOC792824 [Danio rerio], gi\|37362312\|gb\|AAQ91284.1... gi\|187608693, gi... - gi\|187608693\|ref\|NP_001120188.1\| hypothetical protein LOC100145229 [Xenopus (Silurana) tropicalis], ...	185.0	[0..6]	[297..9]
gi\|47226097 - gi\|47226097\|emb\|CAG04471.1\| unnamed protein product [Tetraodon nigroviridis]	184.0	[0..6]	[297..18]
gi\|85083924 - gi\|85083924\|ref\|XP_957212.1\| 4-nitrophenylphosphatase [Neurospora crassa OR74A] gi\|28918300, gi\|... - gi\|32403122\|ref\|XP_322174.1\| hypothetical protein [Neurospora crassa], gi\|28918300\|gb\|EAA27976.1\| 4-...	183.0	[0..9]	[298..12]
gi\|255678721, gi... - gi\|51535198\|dbj\|BAD38247.1\| putative phosphoglycolate phosphatase precursor [Oryza sativa Japonica G... gi\|218201777 - gi\|218201777\|gb\|EEC84204.1\| hypothetical protein OsI_30604 [Oryza sativa Indica Group]	183.0	[0..4]	[295..8]
CG5567-PA - This gene is referred to in FlyBase by the symbol Dmel\CG5567 (CG5567, FBgn0036760). It is a protein...	182.0	[0..6]	[295..27]
gi\|159491082, gi... - gi\|28316388\|dbj\|BAC56941.1\| phosphoglycolate phosphatase precursor [Chlamydomonas reinhardtii], gi\|1...	180.0	[0..2]	[297..30]
gi\|92867882 - gi\|92867882\|gb\|ABE78003.1\| HAD-superfamily hydrolase, subfamily IIA [Medicago truncatula]	179.0	[0..1]	[298..65]

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Predicted Domain #1

Region A:
Residues: [1-298]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKKLSSPKE YKEFIDKFDV FLFDCDGVLW SGSKPIPGVT DTMKLLRSLG KQIIFVSNNS  60
   61 TKSRETYMNK INEHGIAAKL EEIYPSAYSS ATYVKKVLKL PADKKVFVLG EAGIEDELDR 120
  121 VGVAHIGGTD PSLRRALASE DVEKIGPDPS VGAVLCGMDM HVTYLKYCMA FQYLQDPNCA 180
  181 FLLTNQDSTF PTNGKFLPGS GAISYPLIFS TGRQPKILGK PYDEMMEAII ANVNFDRKKA 240
  241 CFVGDRLNTD IQFAKNSNLG GSLLVLTGVS KEEEILEKDA PVVPDYYVES LAKLAETA

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	41.69897
Match:	2oycA
Description:	No description for 2oycA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits