| Protein: | php5 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 415 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for php5.
| Description | E-value | Query Range |
Subject Range |
|
|
181.0 | [0..32] | [301..2] |
|
|
181.0 | [0..37] | [301..15] |
|
|
180.0 | [0..32] | [301..2] |
|
|
177.0 | [0..32] | [301..2] |
|
|
176.0 | [0..55] | [250..5] |
|
|
174.0 | [0..39] | [302..17] |
|
|
173.0 | [0..55] | [260..3] |
|
|
171.0 | [0..37] | [302..15] |
|
|
170.0 | [0..34] | [301..1] |
|
Region A: Residues: [1-97] |
1 11 21 31 41 51
| | | | | |
1 MNSIPDSYSL KQGFPEGLGE YVDPSGNPNS QVRIGYGQDS VSRFQQPVPD VDPTAVNHYN 60
61 ASAPIEVASP FDNVTQGLVG SDAQALAEYW QKTIDTL
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.369 | a.60.14 | Description not found. |
| View | Download | 0.290 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.284 | a.60.14 | Description not found. |
| View | Download | 0.260 | a.134.1 | Fungal elicitin |
| View | Download | 0.248 | c.47.1 | Thioredoxin-like |
| View | Download | 0.240 | a.134.1 | Fungal elicitin |
| View | Download | 0.235 | d.120.1 | Cytochrome b5 |
| View | Download | 0.233 | a.60.8 | HRDC-like |
| View | Download | 0.231 | a.181.1 | Antibiotic binding domain of TipA-like multidrug resistance regulators |
|
Region A: Residues: [98-199] |
1 11 21 31 41 51
| | | | | |
1 EHDDQAVKTL HLPLARIKKV MKTDDDVKNK MISAEAPFLF AKGSEIFIAE LTMRAWLHAK 60
61 KNQRRTLQRS DIANAVSKSE MYDFLIDIIS KDNNNSRASS SQ
|
| Detection Method: | |
| Confidence: | 27.39794 |
| Match: | 1n1jB |
| Description: | Nuclear transcription factor Y subunit gamma (Nf-Yc2) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [200-415] |
1 11 21 31 41 51
| | | | | |
1 AHMSATQVAA MGGMNGLQPF PTQAGLPNQG FPMPTGSQLP FSNQQSSQPS MQYSSHPSRM 60
61 QQMQDIDQSM YKQQRLGSEY PQLQMSDNSG NVNQMNMQRP VMVAPYMAEH LYRYPPTHLE 120
121 SGSSAFRLQS SPMGYQMPQF QGNMRPNMQQ SQMFDPSAYG MSRRPGSPRQ FDQQQRLYSQ 180
181 PNAMMYQTQQ GRQGNPMHQQ FSQQQNPLSR YSQQPQ
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
