YRC Public Data Repository - Protein Structure Prediction

Protein:	SPAC3A11.13
Organism:	Schizosaccharomyces pombe
Length:	114 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC3A11.13.

Description	E-value	Query Range	Subject Range
Eps-15-PB - The gene Epidermal growth factor receptor pathway substrate clone 15 is referred to in FlyBase by th...	97.0	[0..7]	[111..458]
gi\|125809724, gi... - gi\|54636395\|gb\|EAL25798.1\| GA14224-PA [Drosophila pseudoobscura], gi\|125809724\|ref\|XP_001361220.1\| G...	93.0	[0..7]	[111..457]
gi\|29144868, gi\|... - gi\|29165636\|ref\|NP_049403.2\| putative tail component protein [Streptococcus phage DT1], gi\|29144868\|...	92.0	[0..3]	[111..88]
gi\|61383212 - gi\|61383212\|gb\|AAX45244.1\| putative tape measure protein [Streptococcus thermophilus bacteriophage M...	91.0	[0..3]	[111..88]
gi\|49119498 - gi\|49119498\|gb\|AAH73619.1\| Eps15R protein [Xenopus laevis]	91.0	[0..1]	[113..413]
gi\|38107489, gi\|... - gi\|39973273\|ref\|XP_368027.1\| hypothetical protein MG07931.4 [Magnaporthe grisea 70-15], gb\|EAA53654....	91.0	[0..1]	[114..8]
gi\|7521452, gi\|9... - gi\|9632906\|ref\|NP_049935.1\| minor tail protein [Streptococcus phage Sfi19], pir\|\|T09271 probable tai...	90.0	[0..3]	[111..88]

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Predicted Domain #1

Region A:
Residues: [1-114]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEELAKKYQN LQTELSTYVE SLKKLETQLQ ENTTVLNELE KVAPDSNIYK QIGPTLVKQS  60
   61 HEEAKTNVKT RLDFINKEIA RLENQTKISQ EEFSKVKGAI IQAQAAAAPP NPAS

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	3.30103
Match:	2dfsA
Description:	No description for 2dfsA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits