| Protein: | pcp1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 1208 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pcp1.
| Description | E-value | Query Range |
Subject Range |
|
|
419.0 | [0..18] | [1204..761] |
|
|
419.0 | [0..18] | [1204..758] |
|
Region A: Residues: [1-490] |
1 11 21 31 41 51
| | | | | |
1 MSERDFNTQS PKFKDENANS VISQSDFLGK SLKNNNDDYS DFRGSYLNDK SSFQTPLRNG 60
61 SYQPKGSLEF TPLLQSSNKN SDKYNGSLGD KGSFDPNSYG LSAISKQATQ EALSISQGND 120
121 SYDVSKLTDL SKNSEIDHTD GELPANAALT LREQEKVLEK VSRENFGLRI KIVCLEKRLE 180
181 SMAPEQIKEA VKDNVELHAE RANLQLQLKR TESLLQKSED KNFKLEEKVD YLSKVNDVEQ 240
241 SQNVKVFTER IRFLENALEK VQREKDSLST EMEEDKSNKE VDYEYEIRQL QNRLDELSEE 300
301 LDVAQDLLTE KEDEIATLKR QIEEKENSSS AFENEENSSY VHLQEDYAIL QAKCDEFADR 360
361 IQVLTADLEK EKENQIMHES EASIGLTDSM QVHTLQEQLH KANEEIEFLH DQISRMNEEG 420
421 KNFEDIMLQF RSLEEERDVL ESKLQTLEDD NNSLRLMTSS LGNQIESLRT QNREIDEEKN 480
481 HLRLLASKNS
|
| Detection Method: |  |
| Confidence: | 30.522879 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [491-552] |
1 11 21 31 41 51
| | | | | |
1 DKALAETNIR LQEVTKELET LRMKNSNDLN EIHDLREENE GLTLKIDSIT KEKDRLINEL 60
61 EQ
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [553-849] |
1 11 21 31 41 51
| | | | | |
1 RIKSYEVNVS ELNGTIDEYR NKLKDKEETY NEVMNAFQYK DNDLRRFHES INKLQDREKE 60
61 LTSNLEKKNL VISSLRETVA MLEKERESIK KYLSGNAKDL DNTNLMEILN DKISVLQRQL 120
121 TDVKDELDVS EEEREEAIVA GQKLSASFEL MSNEKQALEL KYSSLKNELI NAQNLLDRRE 180
181 EELSELSKKL FEERKIRSGS NDDIEKNKEI NVLNSELADK LAQIRHLESD KMELDKLVHH 240
241 LNRGIEEANI EENAVKKRLC LLMGCDYSSV SILQIVSQIE HFVNQQIQTI RSLKQEL
|
| Detection Method: | |
| Confidence: | 2.81 |
| Match: | 1c1gA |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [850-1208] |
1 11 21 31 41 51
| | | | | |
1 RHDFVQFSGK KEQELSRSFE KFGLGTETKH DILAQRNRNV SEKMNDLENA AQKFFSSPDR 60
61 KNGYLYPSEH TSKIEYLEKT IEDLKLALQD ELKNRNLLMD DISSYNKQTT KLQEKIKWLE 120
121 RERSILIDEL ESYRSNQFNY QNNLVQDKNE LEERLKEIQK ELEVYNNHFM KQAELMTSNV 180
181 TDESQLMLKT LREALQSKTN NIDHLSTILE RNRKEYKSLL DDYNQLRARY KNLQSNTPQS 240
241 TQSGQYESEI KGLSKLTKYL QSKCRREHSL RLDLAFSKKF ILMQLTGYET CNKINLRMLQ 300
301 KIGISPDPDL SKKHIKLKSL IIVVCSIERM KRMKNEWLKQ AQLKQSLQRA AAKAKTANY
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| Detection Method: | |
| Confidence: | 6.69897 |
| Match: | 2tmaA |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
