| Protein: | shk1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 658 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for shk1.
| Description | E-value | Query Range |
Subject Range |
|
|
403.0 | [0..1] | [658..1] |
|
|
374.0 | [0..3] | [656..4] |
|
|
373.0 | [0..3] | [656..4] |
|
|
368.0 | [0..3] | [651..4] |
|
|
363.0 | [0..53] | [658..2] |
|
|
353.0 | [0..4] | [656..6] |
|
Region A: Residues: [1-64] |
1 11 21 31 41 51
| | | | | |
1 MERGTLQPRK KAPNGYGITP IVAHKTGEPV RYEVEDDLRK LKPSRTAPKP PAINTNLAED 60
61 TFSG
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [65-240] |
1 11 21 31 41 51
| | | | | |
1 FPLSQSRTTV SRVSLGSRQH SSSSIRKLQT NVSDVRSYDE RNQKKSAFEN FVSSMSSFLT 60
61 GGGSSPTSSY GSGSASPRKS TVISSPFDPK HVTHVGFNYD TGEFTGMPTE WQALLKVSGI 120
121 TKSEQVQHPQ AVLDAMAFYS QSKKYLEEGA KPPFPRESTE KPLLSVSALS SSSHLQ
|
| Detection Method: | |
| Confidence: | 4.05 |
| Match: | 1f3mA |
| Description: | pak1 autoregulatory domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [241-379] |
1 11 21 31 41 51
| | | | | |
1 PTSATSSSSR LYPSRPAPTP PASSSSSPLL SSQTVKTTTS NASRQPSPLV SSKSTDNIIR 60
61 SHSPVLLTPQ TLSTSETKHI RPNNSTPYQR RAETSTKPKA VATPQKVEAP SAPRLQKRAP 120
121 RQQSNDSAVL AKLQSICNP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [380-658] |
1 11 21 31 41 51
| | | | | |
1 KNPTLLYRNF VKIGQGASGD VYSARQVGTN LSVAIKKMNI NQQPKKEFIV NEILVMKSHH 60
61 HKNIVNFIDT FFYKSELWMV MEYMRGGSLT EVVTNNTLSE GQIAAICKET LEGLQHLHEN 120
121 GIVHRDIKSD NILLSLQGDI KLTDFGFCAQ IDSNMTKRTT MVGTPYWMAP EVVTRKEYGF 180
181 KVDVWSLGIM AIEMVEGEPP YLNENPLRAL YLIATIGTPK ISRPELLSSV FHDFLSKSLT 240
241 VNPKQRPSSG ELLRHPFLKQ AVPVSSLIPL IKSIHHSGK
|
| Detection Method: | |
| Confidence: | 81.522879 |
| Match: | 1f3mC |
| Description: | pak1 |
| Matching Structure (courtesy of the PDB): |
|
