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View Structure Prediction Details

Protein: orc4
Organism: Schizosaccharomyces pombe
Length: 972 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for orc4.

Description E-value Query
Range
Subject
Range
gi|46123707, gi|... - gi|46123707|ref|XP_386407.1| hypothetical protein FG06231.1 [Gibberella zeae PH-1], gi|42551010|gb|E...
414.0 [0..227] [971..19]
gi|114581110, gi... - gi|114581112|ref|XP_001159493.1| PREDICTED: origin recognition complex subunit 4 isoform 8 [Pan trog...
409.0 [0..529] [969..13]
gi|167774171 - gi|167774171|gb|ABZ92520.1| origin recognition complex, subunit 4-like (yeast) [synthetic construct]
ORC4L - origin recognition complex, subunit 4-like (yeast)
408.0 [0..529] [969..13]
ORC1_CRIGR - Origin recognition complex subunit 1 OS=Cricetulus griseus GN=ORC1 PE=2 SV=1
407.0 [0..186] [956..162]
ORC4_PONAB - Origin recognition complex subunit 4 OS=Pongo abelii GN=ORC4 PE=2 SV=1
gi|55731503 - gi|55731503|emb|CAH92463.1| hypothetical protein [Pongo abelii]
406.0 [0..529] [969..13]
ORC4_MOUSE - Origin recognition complex subunit 4 OS=Mus musculus GN=Orc4l PE=1 SV=1
405.0 [0..521] [969..3]
ORC1_RAT - Origin recognition complex subunit 1 OS=Rattus norvegicus GN=Orc1 PE=2 SV=1
402.0 [0..194] [956..165]

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Predicted Domain #1
Region A:
Residues: [1-139]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSPFTNLG NLDTEAIYEN KENEYQTNIT NETSNVQNLS SGNDDQQYPN STNDDANNGL  60
   61 TASQAKLQDI AAVTLFQDNN ISTTTLAPPS PSPLRLNEAP RRRGRPRKYP PKPIDEGSEP 120
  121 IIKRKRGRPP KIKSSSPST

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [140-300]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KLDDPLKPKR GRGRPRLHPL PVVQPSVDEG TTQNNLQMGL DEPNIIEGFA EGHANLSELK  60
   61 PKRGRGRPRK IKPEEGSSSQ NGLSPLVVLP AKRGRGRPPL HRSEQKIANT PISNNVTVES 120
  121 TGTNLHTHSQ LNPENEQSSS EFYSLNPQSE IRKEVVVTDQ P

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [301-543]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LFSTADVPVK RKRGRPPLNK PKILFGTSTE NKIDENRPKR GRGRPRLERP SGLPLDSKSQ  60
   61 SLFKRKRGRP PKIASGIVPL SAFTRKHEDM LHDSDALSLK HFAITSPNNQ QFLNNQQRES 120
  121 APLLPRKRGR PPKKRQENAE IRNITPGLTD SSVHSSSATP QSESSSPNSV SPLLPSSDRL 180
  181 PLLRQSQFTP PPKKPNFEVA IISPKKSQHK LYPNPVVESV FNDVPYSEID SQLHTIKSTI 240
  241 AAR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [544-972]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LCGKSHIPLV GHMDEQTKLY QWVRQTIVLG EGNSVIIVGP RGSGKSVLVD DILSRAAQEI  60
   61 NEKSYVVRLN GTYQTDDKLA LREISRQLSI ELESIESDEA LKSEMNFSDT LTKLLATLSH 120
  121 PVDLGIAEDV MTTSAAVIFV LEEFDLFVQH SRQMLLYNLF DIAQSRKAPI LIIGLTTRYD 180
  181 CSESLEKRVK SRFSHMVIPM RPPSSLSEFE QILKSVLYVS DEGGKDQIIT CWNQRVDELL 240
  241 SDTRSHLHKL VQHHYFASRN LKLLYVDLLF PILSMAPDRP LLADEDFANI SLKVSDHKVE 300
  301 LVKNLSLLEL ALLICAVRFE ARDIPACNFN SAYQEYRQLH QSSVINAAAS GALAHSSRLW 360
  361 GRDVALEAWE TLGSIGLIIP VHPSTNVSGA LSRQCQLWQP EVDINVVSVG LREHRRLPSH 420
  421 YYRWLKEVI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 91.69897
Match: 2qbyA
Description: No description for 2qbyA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle