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View Structure Prediction Details

Protein: mfm3
Organism: Schizosaccharomyces pombe
Length: 41 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mfm3.

Description E-value Query
Range
Subject
Range
MFM1_SCHPO - M-factor OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mfm1 PE=1 SV=1
mfm1 - M-factor precursor Mfm1
48.0 [0..1] [41..1]

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Predicted Domain #1
Region A:
Residues: [1-41]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSMANTVSS SVVNTGNKPS ETLNKTVKNY TPKVPYMCVI A

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.422 a.5.1 DNA helicase RuvA subunit, C-terminal domain
View Download 0.393 a.4.1 Homeodomain-like
View Download 0.371 a.5.1 DNA helicase RuvA subunit, C-terminal domain
View Download 0.366 a.5.2 UBA-like
View Download 0.354 a.5.1 DNA helicase RuvA subunit, C-terminal domain
View Download 0.347 a.5.1 DNA helicase RuvA subunit, C-terminal domain
View Download 0.344 d.7.1 LysM domain
View Download 0.342 a.4.1 Homeodomain-like


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