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View Structure Prediction Details

Protein: mfm1
Organism: Schizosaccharomyces pombe
Length: 42 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mfm1.

Description E-value Query
Range
Subject
Range
MFM3_SCHPO - M-factor OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mfm3 PE=1 SV=1
mfm3 - M-factor precursor Mfm3
50.0 [0..1] [42..1]

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Predicted Domain #1
Region A:
Residues: [1-42]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSMANSVSS SSVVNAGNKP AETLNKTVKN YTPKVPYMCV IA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.354 a.5.7 4-hydroxy-2-oxovalerate aldolase DmpG, communication domain
View Download 0.338 a.5.7 4-hydroxy-2-oxovalerate aldolase DmpG, communication domain
View Download 0.304 a.37.1 A DNA-binding domain in eukaryotic transcription factors
View Download 0.260 a.10.1 Protozoan pheromone proteins
View Download 0.245 a.37.1 A DNA-binding domain in eukaryotic transcription factors
View Download 0.240 d.241.1 Description not found.
View Download 0.229 a.5.1 DNA helicase RuvA subunit, C-terminal domain


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