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View Structure Prediction Details

Protein: mal2
Organism: Schizosaccharomyces pombe
Length: 303 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for mal2.

Predicted Domain #1
Region A:
Residues: [1-130]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDDEEGNATL IDEISVLEAR RDVLLDELKS LDNATLSDLV QKPELSKNLS VNNEFLKETP  60
   61 LNQPALHYDR LSGISFFQPN DPEELSRKTL LVKNKKTGAI ETAPSIPLLG VRFDIMLNPV 120
  121 NIGFTNLSEN 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.572 a.24.17 Group V grass pollen allergen
View Download 0.560 a.24.17 Group V grass pollen allergen
View Download 0.480 a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.454 a.213.1 Description not found.
View Download 0.391 a.29.16 Description not found.
View Download 0.383 d.316.1 Description not found.
View Download 0.378 d.24.1 Pili subunits
View Download 0.354 a.4.5 "Winged helix" DNA-binding domain
View Download 0.350 a.26.1 4-helical cytokines
View Download 0.338 a.78.1 Fatty acid responsive transcription factor FadR, C-terminal domain

Predicted Domain #2
Region A:
Residues: [131-303]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PISSASGMDE ELEGGNRFDV PYYIIFRVFH DSFALYKYTI PSFLNIQEWA DEYLTGKNPE  60
   61 RFRIFLWKVD KLLTAYICRK NALLQINKSL TIDGTNISAN LSCTHLVIQI PKVIQATLVC 120
  121 SSESTRVVKS RIYQYSDENW KRDHRLELSL LDNKRWVNIL VSHLTAPESH ASL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle