YRC Public Data Repository - Protein Structure Prediction

Protein:	tim22
Organism:	Schizosaccharomyces pombe
Length:	175 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tim22.

Description	E-value	Query Range	Subject Range
gi\|68491954, gi\|... - gi\|68491971\|ref\|XP_710236.1\| hypothetical protein CaO19.1352 [Candida albicans SC5314], gi\|68491954\|... orf19.8932, orf1... - orf19.1352 CGDID:CAL0003855 Assembly 19, Contig19-10111 (7528, 6974) CDS, reverse complemented, tran... gi\|238883710 - gi\|238883710\|gb\|EEQ47348.1\| mitochondrial import inner membrane translocase subunit TIM22 [Candida a...	161.0	[0..5]	[173..2]
TIM22_KLULA - Mitochondrial import inner membrane translocase subunit TIM22 OS=Kluyveromyces lactis GN=TIM22 PE=3 ... TIM22_KLULA - Mitochondrial import inner membrane translocase subunit TIM22 OS=Kluyveromyces lactis (strain ATCC 8...	155.0	[0..1]	[172..1]
CG40451-PA, FBpp... - This gene is referred to in FlyBase by the symbol Dmel\CG40451 (CG40451, FBgn0067318). It is a prote...	153.0	[0..38]	[168..1]
gi\|109130740 - gi\|109130740\|ref\|XP_001104863.1\| PREDICTED: similar to Mitochondrial import inner membrane transloca...	153.0	[0..35]	[168..48]
TI17A_MOUSE - Mitochondrial import inner membrane translocase subunit Tim17-A OS=Mus musculus GN=Timm17a PE=1 SV=1	152.0	[0..38]	[168..1]
gi\|57111755 - gi\|57111755\|ref\|XP_538028.1\| PREDICTED: similar to Mitochondrial import inner membrane translocase s...	151.0	[0..38]	[168..1]
gi\|34933423, gi\|... - gi\|34933423\|ref\|XP_228758.2\| PREDICTED: similar to Mitochondrial import inner membrane translocase s...	151.0	[0..38]	[168..1]
AGAP004657-PA, A... - Mitochondrial inner membrane translocase subunit (TIM17)\|protein_coding\|2R:59570835:59571446:1\|gene:... gi\|116126226, gi... - gi\|118788469\|ref\|XP_316737.3\| AGAP004657-PA [Anopheles gambiae str. PEST], gi\|116126226\|gb\|EAA11986....	151.0	[0..38]	[168..1]

Back

Predicted Domain #1

Region A:
Residues: [1-175]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLSGLLPPN LGGNSPNADG NLTPEEKAAL QQAKIIGYMN RISESCVFKS SMAGVLGFGL  60
   61 GGIFGMFISS LDLQHIDPKI YEKPFREQIR IQARDMGSRS FSTAKNFGLL GLIYSGSECC 120
  121 IEAFRAKTDI YNAIAAGVFT GGALAVRSGP KAIVLGGAGF GLFSYGIEKY MHWGE

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	52.677781
Match:	PF02466.10
Description:	No description for PF02466.10 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

		MCM Score	GO Score	GO Term	SCOP Match	SCOP Description
View	Download	0.820	N/A	N/A	f.1.4	Bcl-2 inhibitors of programmed cell death

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits