YRC Public Data Repository - Protein Structure Prediction

Protein:	tim9
Organism:	Schizosaccharomyces pombe
Length:	84 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tim9.

Description	E-value	Query Range	Subject Range
gi\|73955150 - gi\|73955150\|ref\|XP_854099.1\| PREDICTED: similar to Mitochondrial import inner membrane translocase s...	96.0	[0..1]	[83..166]
TIM9_ZYGBA - Mitochondrial import inner membrane translocase subunit Tim9 OS=Zygosaccharomyces bailii GN=TIM9 PE=...	95.0	[0..1]	[83..1]
gi\|39969151, gi\|... - gi\|39969151\|ref\|XP_365966.1\| hypothetical protein MG10186.4 [Magnaporthe grisea 70-15], gb\|EAA57511....	94.0	[0..2]	[78..331]
TIM9_ASPFU - Mitochondrial import inner membrane translocase subunit tim9 OS=Aspergillus fumigatus GN=tim9 PE=3 S... TIM9_ASPFU - Mitochondrial import inner membrane translocase subunit tim9 OS=Neosartorya fumigata (strain ATCC MY...	92.0	[0..1]	[83..1]
gi\|50766075 - gi\|50766075\|ref\|XP_422986.1\| PREDICTED: similar to translocase of inner mitochondrial membrane 10 ho...	92.0	[0..8]	[80..119]
TIM9_CANGA - Mitochondrial import inner membrane translocase subunit TIM9 OS=Candida glabrata GN=TIM9 PE=3 SV=1 TIM9_CANGA - Mitochondrial import inner membrane translocase subunit TIM9 OS=Candida glabrata (strain ATCC 2001 /...	90.0	[0..1]	[83..1]
IM09_EMENI, TIM9... - Mitochondrial import inner membrane translocase subunit tim9 OS=Emericella nidulans GN=tim9 PE=3 SV=... TIM9_EMENI - Mitochondrial import inner membrane translocase subunit tim9 OS=Emericella nidulans (strain FGSC A4 ...	90.0	[0..1]	[83..1]
TIM9_MESCR - Mitochondrial import inner membrane translocase subunit Tim9 OS=Mesembryanthemum crystallinum GN=TIM...	90.0	[0..1]	[79..9]
gi\|190405544 - gi\|190405544\|gb\|EDV08811.1\| mitochondrial import inner membrane translocase subunit TIM9 [Saccharomy... TIM9 - Essential protein of the mitochondrial intermembrane space, forms a complex with Tim10p (TIM10 compl... TIM9_YEAST - Mitochondrial import inner membrane translocase subunit TIM9 OS=Saccharomyces cerevisiae (strain ATC... gi\|151944689 - gi\|151944689\|gb\|EDN62948.1\| translocase of the inner membrane [Saccharomyces cerevisiae YJM789] ORFP:5801 - YEL020W-A, Contig c354 21982-22245 reverse complement Sbay_645.50, Sba... - probable YEL020W-A TIM9 (88536-88799), null	89.0	[0..1]	[83..1]
gi\|149390691 - gi\|149390691\|gb\|ABR25363.1\| mitochondrial import inner membrane translocase subunit tim9 [Oryza sati... TIM9_ORYSJ - Mitochondrial import inner membrane translocase subunit Tim9 OS=Oryza sativa subsp. japonica GN=TIM9... TIM9_ORYSA - Mitochondrial import inner membrane translocase subunit Tim9 - Oryza sativa (Rice)	89.0	[0..1]	[79..9]

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Predicted Domain #1

Region A:
Residues: [1-84]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRLNVKEQE HLTQVLEAKQ LKEYLNMYST LTQNCFSDCV QDFTSSKLSN KESECIAKCA  60
   61 DKFLKHSERV GQRFAEFNAK YMGQ

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	15.39794
Match:	2bskA
Description:	Crystal structure of the TIM9 Tim10 hexameric complex
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits