| Protein: | rqh1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 1328 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for rqh1.
| Description | E-value | Query Range |
Subject Range |
|
|
526.0 | [0..18] | [1328..165] |
|
|
522.0 | [0..502] | [1265..1] |
|
|
521.0 | [0..502] | [1265..1] |
|
|
514.0 | [0..501] | [1265..1] |
|
|
514.0 | [0..501] | [1265..1] |
|
|
503.0 | [0..505] | [1203..3] |
|
|
503.0 | [0..503] | [1204..1] |
|
|
500.0 | [0..505] | [1200..3] |
|
|
499.0 | [0..505] | [1203..3] |
|
|
499.0 | [0..503] | [1204..1] |
|
Region A: Residues: [1-196] |
1 11 21 31 41 51
| | | | | |
1 MTVTKTNLNR HLDWFFRESP QKIENVTSPI KTLDFVKVKV SSSDIVVKDS IPHKSKNVFD 60
61 DFDDGYAIDL TEEHQSSSLN NLKWKDVEGP NILKPIKKIA VPASESEEDF DDVDEEMLRA 120
121 AEMEVFQSCQ PLAVNTADTT VSHSTSSSNV PRSLNKIHDP SRFIKDNDVE NRIHVSSASK 180
181 VASISNTSKP NPIVSE
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [197-391] |
1 11 21 31 41 51
| | | | | |
1 NPISATSVSI EIPIKPKELS NNLPFPRLNN NNTNNNNDNN AIEKRDSASP TPSSVSSQIS 60
61 IDFSTWPHQN LLQYLDILRD EKSEISDRII EVMERYPFSS RFKEWIPKRD ILSQKISSVL 120
121 EVLSNNNNSN NNNGNNGTVP NAKTFFTPPS SITQQVPFPS TIIPESTVKE NSTRPYVNSH 180
181 LVANDKITAT PFHSE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [392-480] |
1 11 21 31 41 51
| | | | | |
1 AVVSPLQSNI RNSDIAEFDE FDIDDADFTF NTTDPINDES GASSDVVVID DEEDDIENRP 60
61 LNQALKASKA AVSNASLLQS SSLDRPLLG
|
| Detection Method: | |
| Confidence: | 28.0 |
| Match: | 2fdcA |
| Description: | No description for 2fdcA was found. |
|
Region A: Residues: [481-1053] |
1 11 21 31 41 51
| | | | | |
1 EMKDKNHKVL MPSLDDPMLS YPWSKEVLGC LKHKFHLKGF RKNQLEAING TLSGKDVFIL 60
61 MPTGGGKSLC YQLPAVIEGG ASRGVTLVIS PLLSLMQDQL DHLRKLNIPS LPLSGEQPAD 120
121 ERRQVISFLM AKNVLVKLLY VTPEGLASNG AITRVLKSLY ERKLLARIVI DEAHCVSHWG 180
181 HDFRPDYKQL GLLRDRYQGI PFMALTATAN EIVKKDIINT LRMENCLELK SSFNRPNLFY 240
241 EIKPKKDLYT ELYRFISNGH LHESGIIYCL SRTSCEQVAA KLRNDYGLKA WHYHAGLEKV 300
301 ERQRIQNEWQ SGSYKIIVAT IAFGMGVDKG DVRFVIHHSF PKSLEGYYQE TGRAGRDGKP 360
361 AHCIMFYSYK DHVTFQKLIM SGDGDAETKE RQRQMLRQVI QFCENKTDCR RKQVLAYFGE 420
421 NFDKVHCRKG CDICCEEATY IKQDMTEFSL QAIKLLKSIS GKATLLQLMD IFRGSKSAKI 480
481 VENGWDRLEG AGVGKLLNRG DSERLFHHLV SEGVFVEKVE ANRRGFVSAY VVPGRQTIIN 540
541 SVLAGKRRII LDVKESSSKP DTSSRSLSRS KTL
|
| Detection Method: | |
| Confidence: | 94.39794 |
| Match: | 2v1xA |
| Description: | No description for 2v1xA was found. |
|
Region A: Residues: [1054-1211] |
1 11 21 31 41 51
| | | | | |
1 PALREYQLKS TTASVDCSIG TREVDEIYDS QMPPVKPSLI HSRNKIDLEE LSGQKFMSEY 60
61 EIDVMTRCLK DLKLLRSNLM AIDDSRVSSY FTDSVLLSMA KKLPRNVKEL KEIHGVSNEK 120
121 AVNLGPKFLQ VIQKFIDEKE QNLEGTELDP SLQSLDTD
|
| Detection Method: | |
| Confidence: | 19.0 |
| Match: | 1wudA |
| Description: | E. coli RecQ HRDC domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1212-1328] |
1 11 21 31 41 51
| | | | | |
1 YPIDTNALSL DHEQGFSDDS DSVYEPSSPI EEGDEEVDGQ RKDILNFMNS QSLTQTGSVP 60
61 KRKSTSYTRP SKSYRHKRGS TSYSRKRKYS TSQKDSRKTS KSANTSFIHP MVKQNYR
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
