YRC Public Data Repository - Protein Structure Prediction

Protein:	SPAC3F10.09
Organism:	Schizosaccharomyces pombe
Length:	264 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC3F10.09.

Description	E-value	Query Range	Subject Range
HIS6_AQUAE - Imidazole glycerol phosphate synthase subunit HisF OS=Aquifex aeolicus GN=hisF PE=3 SV=1 HIS6_AQUAE - Imidazole glycerol phosphate synthase subunit HisF OS=Aquifex aeolicus (strain VF5) GN=hisF PE=3 SV=...	262.0	[0..4]	[264..1]
HIS6_GEOUR - Imidazole glycerol phosphate synthase subunit HisF OS=Geobacter uraniireducens (strain Rf4) GN=hisF ...	258.0	[0..4]	[261..1]
HIS6_GEODF - Imidazole glycerol phosphate synthase subunit HisF OS=Geobacter daltonii (strain DSM 22248 / JCM 158...	258.0	[0..4]	[262..1]
gi\|118581458, gi... - gi\|71839788\|ref\|ZP_00679530.1\| Histidine biosynthesis protein HisF [Pelobacter propionicus DSM 2379]...	255.0	[0..4]	[262..1]
HIS6_GEOSL - Imidazole glycerol phosphate synthase subunit HisF OS=Geobacter sulfurreducens (strain ATCC 51573 / ... HIS6_GEOSL - Imidazole glycerol phosphate synthase subunit HisF OS=Geobacter sulfurreducens GN=hisF PE=3 SV=1	254.0	[0..4]	[262..1]
HIS6_PELTS - Imidazole glycerol phosphate synthase subunit HisF OS=Pelotomaculum thermopropionicum (strain DSM 13...	253.0	[0..4]	[261..1]
HIS6_GEOMG - Imidazole glycerol phosphate synthase subunit HisF OS=Geobacter metallireducens (strain GS-15 / ATCC...	252.0	[0..4]	[262..1]
HIS6_METFK - Imidazole glycerol phosphate synthase subunit HisF OS=Methylobacillus flagellatus (strain KT / ATCC ...	251.0	[0..4]	[262..2]
HIS6_CARHZ - Imidazole glycerol phosphate synthase subunit HisF OS=Carboxydothermus hydrogenoformans (strain ATCC...	251.0	[0..4]	[264..1]
HIS6_DEHMB - Imidazole glycerol phosphate synthase subunit HisF OS=Dehalococcoides mccartyi (strain ATCC BAA-2100...	251.0	[0..4]	[263..1]

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Predicted Domain #1

Region A:
Residues: [1-264]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKSQHTLFR PCIDIHQGQV KQIVGGTLGN DADVKTNYVS LKPSSYYAEL YKLNHLEGAH  60
   61 VIMLGPNCEE AAKTALHTWP GALQIGGGIN ISNAQNWLQE GASKVIVTSW LFPDAQFDLD 120
  121 RLKAISSKIG KDRLVVDVSC RRKDNRWFAA INKWQVMTAF ELNEENLDLL SQYCSEFLIH 180
  181 AADVEGLCKG IDEDLVIKLG EWVKIPTTYA GGGRSIEDLD LVDKLSKGKV DLTIGSALDI 240
  241 FGGVLEFTRV VAWNRRFTPL PLQD

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	34.69897
Match:	2agkA
Description:	No description for 2agkA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits