| Protein: | gti1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 720 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gti1.
| Description | E-value | Query Range |
Subject Range |
|
|
243.0 | [0..86] | [534..270] |
|
|
201.0 | [0..73] | [384..1560] |
|
|
189.0 | [0..93] | [498..915] |
|
|
188.0 | [0..8] | [412..1] |
|
|
182.0 | [0..8] | [365..121] |
|
Region A: Residues: [1-87] |
1 11 21 31 41 51
| | | | | |
1 MTEPGNLQPT FVGFIGTTVD ALLLFEACRQ NYTHFVDRRP QDRERERLIR SGSVFVFDEV 60
61 QSGIKRWTDG IAWSPSRVIG NFLVYRQ
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.367 | a.218.1 | Description not found. |
| View | Download | 0.360 | a.3.1 | Cytochrome c |
| View | Download | 0.318 | d.169.1 | C-type lectin-like |
| View | Download | 0.318 | d.169.1 | C-type lectin-like |
| View | Download | 0.289 | a.36.1 | Signal peptide-binding domain |
| View | Download | 0.289 | a.36.1 | Signal peptide-binding domain |
| View | Download | 0.284 | d.237.1 | Hypothetical protein YjiA, C-terminal domain |
| View | Download | 0.284 | d.237.1 | Hypothetical protein YjiA, C-terminal domain |
| View | Download | 0.281 | a.77.1 | DEATH domain |
| View | Download | 0.269 | b.61.2 | Metalloprotease inhibitor |
| View | Download | 0.213 | d.88.1 | SRF-like |
| View | Download | 0.203 | a.59.1 | PAH2 domain |
| View | Download | 0.203 | d.150.1 | 4'-phosphopantetheinyl transferase |
|
Region A: Residues: [88-178] |
1 11 21 31 41 51
| | | | | |
1 LCKKNSVSDR KRSSKSRSDS DEEEVSAFTV SVPVDVDVAS HVNISSPSAP SLSDNLFPGS 60
61 SFSASSQQNP SSPGSNDIKS EFAAVKNEYV L
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.332 | N/A | N/A | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.331 | N/A | N/A | a.24.3 | Cytochromes |
| View | Download | 0.328 | N/A | N/A | b.1.2 | Fibronectin type III |
| View | Download | 0.320 | N/A | N/A | b.85.6 | Molybdenum cofactor biosynthesis protein MoeA, C-terminal domain |
| View | Download | 0.318 | N/A | N/A | d.141.1 | Ribosomal protein L6 |
| View | Download | 0.303 | N/A | N/A | b.1.2 | Fibronectin type III |
| View | Download | 0.295 | N/A | N/A | b.52.2 | ADC-like |
| View | Download | 0.285 | N/A | N/A | d.93.1 | SH2 domain |
| View | Download | 0.225 | N/A | N/A | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.216 | N/A | N/A | a.74.1 | Cyclin-like |
|
Region A: Residues: [179-294] |
1 11 21 31 41 51
| | | | | |
1 SPTSPTTSAA FPSSFSSLPL VSSKPTGTPF VPKSPPSSSP STTNVSNAST SSAPINPRAP 60
61 QTRRESISST SSIHYCSSSS LSYLHDTERA LVGSLTDSYG FKKSGLIKKT ISLMID
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.234 | a.118.9 | ENTH/VHS domain |
|
Region A: Residues: [295-439] |
1 11 21 31 41 51
| | | | | |
1 GRLHHLISYY TPEDVLNGKL QTPSSFNLFQ QLTISKDLLE YKSFRIPPLV EAAESEKISQ 60
61 LSTLEKRTLP SFPYNPFFSS STAEIDPYHF QGLTLSTSPI SGVESSSLSS AISRNQSNLS 120
121 SFQQQQQFSA LQSISNNALN ENIEQ
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.430 | a.24.11 | Bacterial GAP domain |
| View | Download | 0.430 | a.24.11 | Bacterial GAP domain |
| View | Download | 0.421 | a.25.2 | Thermoplasma ferritin-like 4-helical bundle |
| View | Download | 0.369 | a.160.1 | Poly(A) polymerase, middle domain |
| View | Download | 0.355 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.355 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.329 | a.63.1 | Apolipophorin-III |
| View | Download | 0.294 | a.60.2 | RuvA domain 2-like |
| View | Download | 0.281 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
|
Region A: Residues: [440-494] |
1 11 21 31 41 51
| | | | | |
1 PPIKMAARHS YPNFLQTLPQ YMNDVYNPSG LAFNPVNPNA NNSFVNLNLI QFTSP
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.566 | a.144.1 | PABC (PABP) domain |
| View | Download | 0.566 | a.144.1 | PABC (PABP) domain |
| View | Download | 0.559 | d.68.7 | R3H domain |
| View | Download | 0.559 | d.68.7 | R3H domain |
| View | Download | 0.529 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.507 | a.4.1 | Homeodomain-like |
| View | Download | 0.507 | a.4.1 | Homeodomain-like |
| View | Download | 0.475 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.391 | d.66.1 | Alpha-L RNA-binding motif |
| View | Download | 0.391 | d.66.1 | Alpha-L RNA-binding motif |
| View | Download | 0.387 | a.140.4 | Recombination endonuclease VII, C-terminal and dimerization domains |
| View | Download | 0.305 | a.8.5 | Description not found. |
| View | Download | 0.278 | d.71.1 | Cell division protein MinE topological specificity domain |
| View | Download | 0.265 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.230 | d.66.1 | Alpha-L RNA-binding motif |
|
Region A: Residues: [495-720] |
1 11 21 31 41 51
| | | | | |
1 SQALFDYGEG PYVDQKSQYL QPKQPSSNTD SIDQSSYNMS LAASKQFLTS DTQPDVNENY 60
61 SFISNSIPKN LSTSWNQNMG YHVTNSNSEL ASQNPLYAQQ AVSMESMGNA IQSSAYSAMS 120
121 TPHGGHYDHY AATAKGKNPL AAENHASGGR LPKVPIPPLS NMRRGSVPII PSSASLPMRT 180
181 SGNRFCHYSS LNGNHNRISA RTNPYPINNQ TMLFTEPLSK ERGSLS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
