YRC Public Data Repository - Protein Structure Prediction

Protein:	gst2
Organism:	Schizosaccharomyces pombe
Length:	230 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gst2.

Description	E-value	Query Range	Subject Range
gi\|116327436, gi... - gi\|116327436\|ref\|YP_797156.1\| glutathione transferase [Leptospira borgpetersenii serovar Hardjo-bovi...	171.0	[0..4]	[218..1]
gi\|116331951, gi... - gi\|116331951\|ref\|YP_801669.1\| glutathione transferase [Leptospira borgpetersenii serovar Hardjo-bovi...	171.0	[0..4]	[218..1]
gi\|24216055, gi\|... - gi\|24216055\|ref\|NP_713536.1\| glutathione S-transferase [Leptospira interrogans serovar Lai str. 5660...	169.0	[0..4]	[218..1]
gi\|4468794, gi\|1... - gi\|4468794\|emb\|CAB38119.1\| Glutathione transferase III(b) [Zea mays], pir\|\|T52083 glutathione transf...	167.0	[0..1]	[221..1]
gi\|67548282, gi\|... - gi\|67548282\|ref\|ZP_00426173.1\| Glutathione S-transferase, N-terminal:Glutathione S-transferase, C-te...	167.0	[0..8]	[221..326]
GST1_SCHPO - Glutathione S-transferase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gst1 PE=2 SV=1 gst1 - glutathione S-transferase Gst1	166.0	[0..1]	[227..1]
gi\|56459732, gi\|... - gi\|56459732\|ref\|YP_155013.1\| glutathione S-transferase-like protein [Idiomarina loihiensis L2TR], gi...	166.0	[0..4]	[226..1]
gi\|48770838, gi\|... - gi\|94309912\|ref\|YP_583122.1\| glutathione S-transferase-like protein [Ralstonia metallidurans CH34], ...	166.0	[0..8]	[221..5]
gi\|119187439, gi... - gi\|90303112\|gb\|EAS32743.1\| hypothetical protein CIMG_03767 [Coccidioides immitis RS], gi\|119187439\|r...	165.0	[0..2]	[229..6]

Back

Predicted Domain #1

Region A:
Residues: [1-230]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAHFTLYSHA GGPNPWKVVL ALKELNLSYE QIFYDFQKGE QKCKEHLALN PNGRVPTLVD  60
   61 HKNNDYTIWE SDAILIYLAD KYDTDRKISL SFDDPEYYKL IQYLFFQASG QGVIWGQAGW 120
  121 FNFFHHEPVV SAVTRYRNEI KRVLGVLEDI LKDRDYLVAN KYTIADLSFI PWNYNLGGLF 180
  181 GEGKFSFKEE VPQLDFEKEF PKAYAWNQRL LARPAVKATF EELAKAKEQH

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	30.522879
Match:	1jzrA
Description:	Yeast prion protein ure2p, nitrogen regulation fragment
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
antioxidant activity	3.66884588063322	bayes_pls_golite062009
peroxidase activity	3.43831566988273	bayes_pls_golite062009
oxidoreductase activity, acting on peroxide as acceptor	3.43831566988273	bayes_pls_golite062009
glutathione peroxidase activity	2.56524997297011	bayes_pls_golite062009
peroxiredoxin activity	2.12777217096121	bayes_pls_golite062009
thioredoxin peroxidase activity	1.96134566495756	bayes_pls_golite062009
oxidoreductase activity, acting on sulfur group of donors	1.8187537496904	bayes_pls_golite062009
protein disulfide oxidoreductase activity	1.47769936616412	bayes_pls_golite062009
disulfide oxidoreductase activity	1.32811008894503	bayes_pls_golite062009
selenium binding	1.1082524159827	bayes_pls_golite062009
binding	0.704132579378598	bayes_pls_golite062009
catalytic activity	0.672192331361968	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: