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View Structure Prediction Details

Protein: gsa1
Organism: Schizosaccharomyces pombe
Length: 498 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gsa1.

Description E-value Query
Range
Subject
Range
gi|17646699 - gi|17646699|gb|AAL41009.1|AF448236_1 glutathione synthetase [Schizosaccharomyces pombe]
756.0 [0..1] [498..1]
gi|15277522 - gi|15277522|gb|AAK93946.1| glutathione synthetase GSHS1 [Medicago truncatula]
708.0 [0..2] [497..87]
gi|9754870 - gi|9754870|gb|AAF98121.1|AF231137_1 glutathione synthetase precursor [Pisum sativum]
704.0 [0..2] [497..83]
gi|37222544, gi|... - gi|37681498|gb|AAP69599.1| glutathione synthetase [Lotus corniculatus var. japonicus], gi|37222544|g...
699.0 [0..6] [497..85]
GSHB_BRAJU - Glutathione synthetase, chloroplastic OS=Brassica juncea GN=GSH2 PE=2 SV=1
698.0 [0..1] [497..60]
GSHB_ARATH - Glutathione synthetase, chloroplastic OS=Arabidopsis thaliana GN=GSH2 PE=2 SV=3
685.0 [0..2] [496..70]

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Predicted Domain #1
Region A:
Residues: [1-498]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIEKYTPEQ IEELGKGARD FAFAHGVVFT ELSVSKEGRN IATQIPITLF PSVIPHGAFV  60
   61 EAVSVQKAYN KLYAKIANDY EFLRLHLQSI TKYDEFMNKL WNLYQKHREA VAHLKENQFQ 120
  121 PLSLGVFRSD YMVHQDDSFI GCKQVEFNTI SVSFGGVSKA VSNLHAYCSQ SGLYRKPLTT 180
  181 NYLTVNTSVS GICTGISNAV DAYRDYVKNI TSKMNIASDN TKPIVLFVVK GGERNITDQR 240
  241 TLEYELLNRF HVISKRIDIA ELNSLIHDKS SNKLYMKTSF TTYEVAVVYY RVGYALDDYP 300
  301 SQEAWDMRLT IENTLAIKCP SISTHLAGSK KIQQVLAESN ALERFLEGDE LQAVRSTFAD 360
  361 MYPLDDTPRG KEGIKLAFEK PEDFVLKPQR EGGGNNTYGK DIPGLLSKMP QEEWDSYILM 420
  421 RYINAVPSQN YILKGERPEK FDVVDEIGIL GTIVWNIKTD EVVQNGQSGF ICRTKPKKTN 480
  481 EGGVATGYAS LSSIELSE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 165.0
Match: 1m0tA
Description: Eukaryotic glutathione synthetase, substrate-binding domain; Eukaryotic glutathione synthetase ATP-binding domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle